RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 VPS33AQ96AX1 596 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 AK8Q96MA6 479 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 GBP5Q96PP8 586 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TCF7L2Q9NQB0 619 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 SH2B1Q9NRF2 756 aaPredicted RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 MSRAQ9UJ68 235 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 FAM234BA2RU67 622 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 DDX39AO00148 427 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 NDC80O14777 642 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 DIAPH2O60879 1101 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 MTRF1O75570 445 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 KRT38O76015 456 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 REC8O95072 547 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CYP1A2P05177 515 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PBLDP30039 288 aaPredicted RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 HOXC12P31275 282 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PPP5CP53041 499 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PLAURQ03405 335 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 KLHL17Q6TDP4 642 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PDZD3Q86UT5 571 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 TTC39CQ8N584 583 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 RNF152Q8N8N0 203 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ADAMTS15Q8TE58 950 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 HERVK_113Q902F9 699 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 RTF1Q92541 710 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 MAML1Q92585 1016 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 HSPH1Q92598 858 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 RAB24Q969Q5 203 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CDK15Q96Q40 435 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 NTPCRQ9BSD7 190 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 TCHPQ9BT92 498 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ZDHHC5Q9C0B5 715 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 BTBD1Q9H0C5 482 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 NKX2-4Q9H2Z4 354 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 SACM1LQ9NTJ5 587 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 SRP68Q9UHB9 627 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 BACE2Q9Y5Z0 518 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 AKNAQ7Z591 1439 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 SYNJ2BP-COX16A0A087WUM0 186 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PLOD2O00469 737 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 MEIS1O00470 390 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 SGPL1O95470 568 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 AFPP02771 609 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 GCH1P30793 250 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ADH7P40394 386 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 MLH1P40692 756 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 KIF11P52732 1056 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 SLC16A1P53985 500 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CREB5Q02930 508 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ZBTB16Q05516 673 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 GALNT2Q10471 571 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 WDR44Q5JSH3 913 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 NAA16Q6N069 864 aaPredicted RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 GPR149Q86SP6 731 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.09□□□□□ -1.75
SUB1-202ENST00000502453 ZNF606Q8WXB4 792 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 C1orf159Q96HA4 380 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CLMNQ96JQ2 1002 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 NOL10Q9BSC4 688 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 ANAPC5Q9UJX4 755 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 PCOLCE2Q9UKZ9 415 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 GTPBP1O00178 669 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 SYT5O00445 386 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CCP110O43303 1012 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CLASP2O75122 1294 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 CSH1P0DML2 217 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CSH2P0DML3 217 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ACADMP11310 421 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 TNNT1P13805 278 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 MAP2K6P52564 334 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 IRF9Q00978 393 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 POU4F3Q15319 338 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 SLC35F1Q5T1Q4 408 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CREB3L3Q68CJ9 461 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 RRAGAQ7L523 313 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ZZZ3Q8IYH5 903 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 DCLK2Q8N568 766 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 BRI3BPQ8WY22 251 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 TBC1D5Q92609 795 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 DPF2Q92785 391 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 RNF125Q96EQ8 232 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 C16orf45Q96MC5 204 aaPredicted RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 MAP7D2Q96T17 732 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 INSM2Q96T92 566 aaPredicted RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 IQCGQ9H095 443 aaKnown RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 GP6Q9HCN6 339 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 ZNF304Q9HCX3 659 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 CHORDC1Q9UHD1 332 aaPredicted RBP4.09□□□□□ -1.75
SUB1-202ENST00000502453 CTNNA3Q9UI47 895 aa4.09□□□□□ -1.75
SUB1-202ENST00000502453 THOC2Q8NI27 1593 aaKnown RBP4.09□□□□□ -1.76
SUB1-202ENST00000502453 ARPC4-TTLL3A0A0A6YYG9 625 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 M0QX08 132 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 ASNA1O43681 348 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 CAPNS1P04632 268 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 PTPRAP18433 802 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 HDCP19113 662 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 ABCD3P28288 659 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 ARL3P36405 182 aa4.09□□□□□ -1.76
SUB1-202ENST00000502453 NNMTP40261 264 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms