RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ZNF610Q8N9Z0 462 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 ANKRD52Q8NB46 1076 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 SIMC1Q8NDZ2 872 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 LTV1Q96GA3 475 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 UNKQ9C0B0 810 aaKnown RBP4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 ATP13A1Q9HD20 1204 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 TOMM22Q9NS69 142 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 MARCH2Q9P0N8 246 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CBLCQ9ULV8 474 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 TAF6LQ9Y6J9 622 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 NKTRP30414 1462 aaKnown RBP4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 MYO5BQ9ULV0 1848 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CFAP65Q6ZU64 1925 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 RAB3GAP2Q9H2M9 1393 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 DIP2AQ14689 1571 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 A0A1W2PPH5 198 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 GTPBP10A4D1E9 387 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 C19orf81C9J6K1 198 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 KRIT1O00522 736 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 KDM1AO60341 852 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 MTHFD1P11586 935 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 GYS1P13807 737 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 RAC2P15153 192 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 BCL6P41182 706 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 STAT1P42224 750 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 NPTX2P47972 431 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 ALDH9A1P49189 494 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 ATXN1P54253 815 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 DCAF7P61962 342 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 NEXNQ0ZGT2 675 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 SNX17Q15036 470 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 POLD3Q15054 466 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 MEA1Q16626 185 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 AOC3Q16853 763 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 INF2Q27J81 1249 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 GAB4Q2WGN9 574 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 CEP68Q76N32 757 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 C16orf59Q7L2K0 433 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 OTOP1Q7RTM1 612 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 DAAM2Q86T65 1068 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 CCDC33Q8N5R6 958 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 SH3KBP1Q96B97 665 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 C18orf8Q96DM3 657 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 RRP36Q96EU6 259 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 MISP3Q96FF7 219 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 VMP1Q96GC9 406 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 APIPQ96GX9 242 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 MAELQ96JY0 434 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 MPHOSPH9Q99550 1183 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 FAM167BQ9BTA0 163 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 BOCQ9BWV1 1114 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 C22orf23Q9BZE7 217 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 EPB41L1Q9H4G0 881 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 OBP2BQ9NPH6 170 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 OLA1Q9NTK5 396 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 GJB4Q9NTQ9 266 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 NAP1L2Q9ULW6 460 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 XRN1Q8IZH2 1706 aaKnown RBP4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 PITPNM2Q9BZ72 1349 aa4.91□□□□□ -1.62
HMGB1P21-201ENST00000502313 CHD2O14647 1828 aaKnown RBP4.9□□□□□ -1.62
HMGB1P21-201ENST00000502313 TECPR2O15040 1411 aa4.9□□□□□ -1.62
HMGB1P21-201ENST00000502313 SLC12A8A0AV02 714 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 C7orf72A4D263 438 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TTC36A6NLP5 189 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 F8W8V4 182 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 H7BY64 318 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 KCNK3O14649 394 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 DOK2O60496 412 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TADA3O75528 432 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 SKAP2O75563 359 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 CLEC2LP0C7M8 214 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TSHRP16473 764 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 XBP1P17861 261 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 PIK3CAP42336 1068 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 KRT32Q14532 448 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 CHRNA2Q15822 529 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TIGD6Q17RP2 521 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZACNQ401N2 412 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 RILPL1Q5EBL4 403 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ANGEL2Q5VTE6 544 aaKnown RBP4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 NUGGCQ68CJ6 796 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 HAUS3Q68CZ6 603 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZNF449Q6P9G9 518 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 DSTYKQ6XUX3 929 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 FRMD7Q6ZUT3 714 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 LMNTD2Q8IXW0 634 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 MSL3Q8N5Y2 521 aaKnown RBP4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 RNF152Q8N8N0 203 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLBD2Q8NHP8 589 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 BRI3BPQ8WY22 251 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 SNX21Q969T3 373 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC47Q96A33 483 aaKnown RBP4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 EAF2Q96CJ1 260 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TBC1D31Q96DN5 1066 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 RADILQ96JH8 1075 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ASB2Q96Q27 587 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 KATNAL1Q9BW62 490 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZMAT4Q9H898 229 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 CNTD2Q9H8S5 307 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms