RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 SRSF5Q13243 272 aaKnown RBP10.13□□□□□ -0.79
CCDC171-209ENST00000498725 CAPSQ13938 189 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 TFDP1Q14186 410 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 TANGO2Q6ICL3 276 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 RSPO2Q6UXX9 243 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-209ENST00000498725 MAEAQ7L5Y9 396 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 OTUD6AQ7L8S5 288 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 TPH2Q8IWU9 490 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 EXOC8Q8IYI6 725 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 GSTCDQ8NEC7 633 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 LNX1Q8TBB1 728 aaPredicted RBP10.13□□□□□ -0.79
CCDC171-209ENST00000498725 ASAP3Q8TDY4 903 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 CLDN23Q96B33 292 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 AIFM3Q96NN9 605 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 NELL2Q99435 816 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 CXCL16Q9H2A7 254 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 VAV3Q9UKW4 847 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 COL4A2P08572 1712 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
CCDC171-209ENST00000498725 MAP1BP46821 2468 aaKnown RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 DTNBO60941 627 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 IFNAR1P17181 557 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 CEBPBP17676 345 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 LIG1P18858 919 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 IGFBP6P24592 240 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 RPS9P46781 194 aaKnown RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 PPP2R5CQ13362 524 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 TUSC3Q13454 348 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 FZD5Q13467 585 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 AMHR2Q16671 573 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 SLC5A9Q2M3M2 681 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 HEATR6Q6AI08 1181 aaKnown RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 LAIR1Q6GTX8 287 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 SLC27A1Q6PCB7 646 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 BLOC1S2Q6QNY1 142 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 PIK3R5Q8WYR1 880 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 NELL1Q92832 810 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 CCDC51Q96ER9 411 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 KIF12Q96FN5 646 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 BORCS6Q96GS4 357 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 CCDC43Q96MW1 224 aaKnown RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 LARP6Q9BRS8 491 aaKnown RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 BRD9Q9H8M2 597 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 XPNPEP1Q9NQW7 623 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 PRMT8Q9NR22 394 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 SH3GLB2Q9NR46 395 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 KCNJ14Q9UNX9 436 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 USP20Q9Y2K6 914 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 MRPS17Q9Y2R5 130 aaKnown RBP10.12□□□□□ -0.79
CCDC171-209ENST00000498725 SPTBN2O15020 2390 aa10.12□□□□□ -0.79
CCDC171-209ENST00000498725 LRRIQ4A6NIV6 560 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 CHURC1-FNTBB4DL54 471 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 I3L4J1 428 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 SLC30A4O14863 429 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 CCNT1O60563 726 aaKnown RBP10.11□□□□□ -0.79
CCDC171-209ENST00000498725 ECI2O75521 394 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 C1RP00736 705 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 RHOP08100 348 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 PDIA3P30101 505 aaKnown RBP10.11□□□□□ -0.79
CCDC171-209ENST00000498725 FNTBP49356 437 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 NRLP54845 237 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 ARPP19P56211 112 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 DMWDQ09019 674 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 STK3Q13188 491 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 SIM2Q14190 667 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-209ENST00000498725 MXD4Q14582 209 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-209ENST00000498725 EPHA7Q15375 998 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 TSGA10IPQ3SY00 556 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-209ENST00000498725 C4orf19Q8IY42 314 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 NETO1Q8TDF5 533 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 CORO1BQ9BR76 489 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 POLR3FQ9H1D9 316 aaPredicted RBP10.11□□□□□ -0.79
CCDC171-209ENST00000498725 LMAN1LQ9HAT1 526 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 SEMA4GQ9NTN9 838 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 SNTG2Q9NY99 539 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 CDY1Q9Y6F8 540 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 GPR179Q6PRD1 2367 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 NID2Q14112 1375 aa10.11□□□□□ -0.79
CCDC171-209ENST00000498725 CCDC194A0A1B0GVG4 234 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 SHISA7A6NL88 538 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
CCDC171-209ENST00000498725 PTGESO14684 152 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 THP07101 528 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 GLRA2P23416 452 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 RPS6KB1P23443 525 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 GDI1P31150 447 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 HOXA9P31269 272 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 SATB1Q01826 763 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 PPP2R5DQ14738 602 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 CCDC6Q16204 474 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 PRR23CQ6ZRP0 262 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 KRT25Q7Z3Z0 450 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 NOSTRINQ8IVI9 506 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 GPR65Q8IYL9 337 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms