RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 DPP7Q9UHL4 492 aa9.31□□□□□ -0.92
HMGXB4-207ENST00000498212 KCNG1Q9UIX4 513 aa9.31□□□□□ -0.92
HMGXB4-207ENST00000498212 ANK1P16157 1881 aa9.31□□□□□ -0.92
HMGXB4-207ENST00000498212 KIF4AO95239 1232 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 GLUD1P00367 558 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 PLS3P13797 630 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 LONP1P36776 959 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 UBA7P41226 1012 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 GRM5P41594 1212 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 SMTNP53814 917 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 YARSP54577 528 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 ZXDAP98168 799 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 CREMQ03060 361 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 STRN3Q13033 797 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 GLRA4Q5JXX5 417 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 MPZL3Q6UWV2 235 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 C15orf39Q6ZRI6 1047 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 GPR149Q86SP6 731 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 ZBTB33Q86T24 672 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 GLYCTKQ8IVS8 523 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 GPR65Q8IYL9 337 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 CEP120Q8N960 986 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 RASSF8Q8NHQ8 419 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 RIN2Q8WYP3 895 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 TCHPQ9BT92 498 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 CCDC94Q9BW85 323 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 TARS2Q9BW92 718 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 CDT1Q9H211 546 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 PTPRHQ9HD43 1115 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 MAN1C1Q9NR34 630 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 TOPORSQ9NS56 1045 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 FNIP2Q9P278 1114 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 LARSQ9P2J5 1176 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 ARIH1Q9Y4X5 557 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 TECTAO75443 2155 aa9.3□□□□□ -0.92
HMGXB4-207ENST00000498212 DOCK6Q96HP0 2047 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 TCHHQ07283 1943 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 DOCK8Q8NF50 2099 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 NPHP3-ACAD11A0A0J9YXS1 232 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 C2CD4DB7Z1M9 353 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 H0YCG3 227 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 TMEM189-UBE2V1I3L0A0 370 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 K7ELQ4 463 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 MCF2P10911 925 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 PLCG1P19174 1290 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 SYT1P21579 422 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 PROZP22891 400 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 OSTNP61366 133 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 GRIN1Q05586 938 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 ELAVL2Q12926 359 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 PTPN21Q16825 1174 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 ARSHQ5FYA8 562 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 TRIM67Q6ZTA4 783 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 HFE2Q6ZVN8 426 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 GPBP1Q86WP2 473 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 CEP57Q86XR8 500 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 PALB2Q86YC2 1186 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 TDRD5Q8NAT2 981 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 TMEM161BQ8NDZ6 487 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 FEZF2Q8TBJ5 459 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 INTS4Q96HW7 963 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 UROC1Q96N76 676 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 PPP1R10Q96QC0 940 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 TTPALQ9BTX7 342 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 ODF2LQ9ULJ1 636 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
HMGXB4-207ENST00000498212 SMIM28A0A1B0GU29 152 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 CCDC195A0A1B0GUA6 201 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 TMEM221A6NGB7 291 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 M0R296 226 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ABLIM1O14639 778 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 TGM5O43548 720 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 TOM1L1O75674 476 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 B3GAT3O94766 335 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 BRD1O95696 1058 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 C1RP00736 705 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 SPATA31D3P0C874 917 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 MYBP10242 640 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 MAPTP10636 758 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 HARSP12081 509 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 RPL17P18621 184 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 CLCNKBP51801 687 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 NCKAP1LP55160 1127 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 SIGLEC14Q08ET2 396 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 RESTQ13127 1097 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 DHX8Q14562 1220 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 MCM6Q14566 821 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 NOLC1Q14978 699 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 KARSQ15046 597 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 PSMD5Q16401 504 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 XKR4Q5GH76 650 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 FAM171A1Q5VUB5 890 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 PDXDC1Q6P996 788 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 PRSS55Q6UWB4 352 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms