RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 DPP7Q9UHL4 492 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 KIAA1024Q9UPX6 916 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 PCDHB6Q9Y5E3 794 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 VPS13AQ96RL7 3174 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 PP2D1A8MPX8 630 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 PROB1E7EW31 1015 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 MUTP22033 750 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 PSMD5Q16401 504 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 TMEM132AQ24JP5 1023 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 GET4Q7L5D6 327 aaPredicted RBP20.42■□□□□ 0.86
PRKCB-209ENST00000498058 DAW1Q8N136 415 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 CEP120Q8N960 986 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 STAMQ92783 540 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 IRF2BPLQ9H1B7 796 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 PIDD1Q9HB75 910 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 DDX19AQ9NUU7 478 aaKnown RBP20.42■□□□□ 0.86
PRKCB-209ENST00000498058 LRWD1Q9UFC0 647 aa20.42■□□□□ 0.86
PRKCB-209ENST00000498058 DMDP11532 3685 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 E9PMD0 336 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 LAMP2P13473 410 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 U2AF2P26368 475 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRKCB-209ENST00000498058 TRAPPC10P48553 1259 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 MCM2P49736 904 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 PTGDRQ13258 359 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 HAUS3Q68CZ6 603 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 ELMSAN1Q6PJG2 1045 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 RSPO2Q6UXX9 243 aaPredicted RBP20.41■□□□□ 0.86
PRKCB-209ENST00000498058 TAS1R3Q7RTX0 852 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 KCNK18Q7Z418 384 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 IGSF22Q8N9C0 903 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 C3orf58Q8NDZ4 430 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 PPP1R10Q96QC0 940 aaKnown RBP20.41■□□□□ 0.86
PRKCB-209ENST00000498058 ADPGKQ9BRR6 497 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 RPP25Q9BUL9 199 aaKnown RBP20.41■□□□□ 0.86
PRKCB-209ENST00000498058 GOLGA2P5Q9HBQ8 144 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 FBXL21Q9UKT6 434 aa20.41■□□□□ 0.86
PRKCB-209ENST00000498058 ANHXE9PGG2 379 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 CDC25AP30304 524 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 NBL1P41271 181 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 HMGN5P82970 282 aaKnown RBP20.4■□□□□ 0.86
PRKCB-209ENST00000498058 COL4A3Q01955 1670 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 CREMQ03060 361 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 SOX4Q06945 474 aaPredicted RBP20.4■□□□□ 0.86
PRKCB-209ENST00000498058 HTR4Q13639 388 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 ATF7IP2Q5U623 682 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 GRASPQ7Z6J2 395 aaPredicted RBP20.4■□□□□ 0.86
PRKCB-209ENST00000498058 ZSCAN31Q96LW9 406 aaPredicted RBP20.4■□□□□ 0.86
PRKCB-209ENST00000498058 MMTAG2Q9BU76 263 aaKnown RBP20.4■□□□□ 0.86
PRKCB-209ENST00000498058 WNT16Q9UBV4 365 aa20.4■□□□□ 0.86
PRKCB-209ENST00000498058 MYH15Q9Y2K3 1946 aa20.39■□□□□ 0.86
PRKCB-209ENST00000498058 I3L4J1 428 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 MEFVO15553 781 aaPredicted RBP20.39■□□□□ 0.85
PRKCB-209ENST00000498058 FGFR3P22607 806 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 CLCNKBP51801 687 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 MAPK7Q13164 816 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 PDIA5Q14554 519 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 DCAF4L1Q3SXM0 396 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 CCDC105Q8IYK2 499 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 FAM184AQ8NB25 1140 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 SNX29Q8TEQ0 813 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 KIFAP3Q92845 792 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 IFT74Q96LB3 600 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 RUSC1Q9BVN2 902 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 PTPRHQ9HD43 1115 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 CA14Q9ULX7 337 aa20.39■□□□□ 0.85
PRKCB-209ENST00000498058 ABLIM1O14639 778 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 CCL16O15467 120 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 C8AP07357 584 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 SRFP11831 508 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 NPTX2P47972 431 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 EFNA5P52803 228 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 PEX3P56589 373 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 FRMD5Q7Z6J6 570 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 GPR152Q8TDT2 470 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 ACO2Q99798 780 aaKnown RBP20.38■□□□□ 0.85
PRKCB-209ENST00000498058 CDT1Q9H211 546 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 SH2B1Q9NRF2 756 aaPredicted RBP20.38■□□□□ 0.85
PRKCB-209ENST00000498058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.38■□□□□ 0.85
PRKCB-209ENST00000498058 NOL7Q9UMY1 257 aaKnown RBP20.38■□□□□ 0.85
PRKCB-209ENST00000498058 TNFSF13BQ9Y275 285 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 NUMBLQ9Y6R0 609 aa20.38■□□□□ 0.85
PRKCB-209ENST00000498058 PTPRZ1P23471 2315 aaPredicted RBP20.38■□□□□ 0.85
PRKCB-209ENST00000498058 SMIM28A0A1B0GU29 152 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 PRR23AA6NEV1 266 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 TMEM189-UBE2V1I3L0A0 370 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 K7ERI5 159 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 HIP1RO75146 1068 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 FSHRP23945 695 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 TKTP29401 623 aaKnown RBP20.37■□□□□ 0.85
PRKCB-209ENST00000498058 OR1D2P34982 312 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 BRCC3P46736 316 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 GNL2Q13823 731 aaKnown RBP20.37■□□□□ 0.85
PRKCB-209ENST00000498058 RAB33AQ14088 237 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 UPP1Q16831 310 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 XKR4Q5GH76 650 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 POTEHQ6S545 545 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 ALKAL1Q6UXT8 129 aa20.37■□□□□ 0.85
PRKCB-209ENST00000498058 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.37■□□□□ 0.85
PRKCB-209ENST00000498058 DTWD2Q8NBA8 298 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms