RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GH2P01242 217 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 EPHX1P07099 455 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 CTGFP29279 349 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 NTF4P34130 210 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 HMGCS2P54868 508 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 PDCD2Q16342 344 aaPredicted RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 CERKLQ49MI3 558 aaPredicted RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 TREML2Q5T2D2 321 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 JAKMIP3Q5VZ66 844 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 TSHZ3Q63HK5 1081 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 ZCCHC8Q6NZY4 707 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 CTR9Q6PD62 1173 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 C11orf74Q86VG3 221 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 CHD1LQ86WJ1 897 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 CRACR2BQ8N4Y2 399 aaPredicted RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 CD99L2Q8TCZ2 262 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 PARD3BQ8TEW8 1205 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 LPAR1Q92633 364 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 TRIM63Q969Q1 353 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 AHCYL2Q96HN2 611 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 SCLYQ96I15 445 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 ZNF333Q96JL9 665 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 WNT10AQ9GZT5 417 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 GBP3Q9H0R5 595 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 ASCC2Q9H1I8 757 aaPredicted RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 SUSD2Q9UGT4 822 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 SRRDQ9UH36 339 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 DDX20Q9UHI6 824 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 ADAM30Q9UKF2 790 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 TMX2Q9Y320 296 aa6.74□□□□□ -1.33
TMEM39A-212ENST00000497993 PRAMEF27A3QJZ7 478 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 TRIM75PA6NK02 468 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 GAS7O60861 476 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 FKBP9O95302 570 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 PCP11498 1178 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 NAT1P18440 290 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 CDK8P49336 464 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 ERVK-21P61565 698 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 ELF2Q15723 593 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 CPSF6Q16630 551 aaKnown RBP eCLIP6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 SHROOM1Q2M3G4 852 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 ANKRD45Q5TZF3 282 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 FKBP9P1Q75LS8 142 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 SIAH1Q8IUQ4 282 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 CMTR2Q8IYT2 770 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 NKAPQ8N5F7 415 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 CXorf38Q8TB03 319 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 ENOX1Q8TC92 643 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 CDK5RAP3Q96JB5 506 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 TBATAQ96M53 351 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 HELLSQ9NRZ9 838 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 C1GALT1Q9NS00 363 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 POLG2Q9UHN1 485 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 ADAMTS5Q9UNA0 930 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 TRIM17Q9Y577 477 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 SLC4A4Q9Y6R1 1079 aa6.73□□□□□ -1.33
TMEM39A-212ENST00000497993 A0A1W2PRG0 241 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 SMIM22K7EJ46 135 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ORC4O43929 436 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 DNAJA2O60884 412 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 CYP2C8P10632 490 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 CYP2D6P10635 497 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 RBP3P10745 1247 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ZKSCAN1P17029 563 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ITGB7P26010 798 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 HOXD10P28358 340 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ADCYAP1R1P41586 468 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 GRIA2P42262 883 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 LSSP48449 732 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 HERVK_113P62684 666 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 CYP27A1Q02318 531 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 TBX2Q13207 712 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 PDE1CQ14123 709 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 GALEQ14376 348 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 KIF22Q14807 665 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 XRRA1Q6P2D8 792 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 GADL1Q6ZQY3 521 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 CATSPERGQ6ZRH7 1159 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 CHST15Q7LFX5 561 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 MB21D1Q8N884 522 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 SLC44A5Q8NCS7 719 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 BVESQ8NE79 360 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 KCTD13Q8WZ19 329 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 USP6NLQ92738 828 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 FAXDC2Q96IV6 333 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 TBC1D32Q96NH3 1257 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 FSD1Q9BTV5 496 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ARHGAP39Q9C0H5 1083 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 KLHL25Q9H0H3 589 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 SH2D4AQ9H788 454 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 MKS1Q9NXB0 559 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms