RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	GOLGA6A	Q9NYA3	693 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	LRRC14B	A6NHZ5	514 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	TEX33	O43247	280 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	MYB	P10242	640 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	RAP2B	P61225	183 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	CCDC157	Q569K6	752 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	FAM83A	Q86UY5	434 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	ANKRD35	Q8N283	1001 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	IFI44	Q8TCB0	444 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	DIS3L	Q8TF46	1054 aa	Known RBP	7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	CASKIN2	Q8WXE0	1202 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	RGMA	Q96B86	450 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	MIEF2	Q96C03	454 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	WWC2-AS2	Q96NR7	200 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	SAMD11	Q96NU1	681 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	VRK1	Q99986	396 aa	Predicted RBP	7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	MRI1	Q9BV20	369 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	LSM14B	Q9BX40	385 aa	Known RBP	7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	KRTAP4-5	Q9BYR2	181 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	KCNH6	Q9H252	994 aa		7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	HECA	Q9UBI9	543 aa	Predicted RBP	7.35	□□□□□ -1.23
TRA2A-210	ENST00000497730	CXorf49	A8MYA2	514 aa	Predicted RBP	7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	PRR5-ARHGAP8	B1AHC4	643 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	FTL	P02792	175 aa	Predicted RBP	7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	ATP5J	P18859	108 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	HK1	P19367	917 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	ATP8B2	P98198	1209 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	RAB39A	Q14964	217 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	GFOD2	Q3B7J2	385 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	ARHGAP29	Q52LW3	1261 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	THEMIS2	Q5TEJ8	643 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	SPTY2D1	Q68D10	685 aa	Predicted RBP	7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	ZNF585A	Q6P3V2	769 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	B3GNT9	Q6UX72	402 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	DOK3	Q7L591	496 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	GSPT2	Q8IYD1	628 aa	Known RBP	7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	PGBD4	Q96DM1	585 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	C1GALT1C1	Q96EU7	318 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	FAM89A	Q96GI7	184 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	MRGPRX4	Q96LA9	322 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	TAAR9	Q96RI9	348 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	ADO	Q96SZ5	270 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	MYOC	Q99972	504 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	SPON1	Q9HCB6	807 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	CD248	Q9HCU0	757 aa		7.34	□□□□□ -1.23
TRA2A-210	ENST00000497730	VSTM5	A8MXK1	200 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	CTNND1	O60716	968 aa	Known RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	SNRPA1	P09661	255 aa	Known RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	ZNF280A	P59817	542 aa	Predicted RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	CTXN1	P60606	82 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	CREM	Q03060	361 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	KHDC1	Q4VXA5	237 aa	Known RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730		Q6ZSN1	163 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	RNF169	Q8NCN4	708 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	C3orf20	Q8ND61	904 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	MDGA1	Q8NFP4	955 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	TTC8	Q8TAM2	541 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	ATXN2L	Q8WWM7	1075 aa	Known RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	TFAP2C	Q92754	450 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	C8orf49	Q96NF6	230 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	ACO2	Q99798	780 aa	Known RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	KRTAP17-1	Q9BYP8	105 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	CPEB1	Q9BZB8	566 aa	Known RBP	7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	KMT5A	Q9NQR1	393 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	SMPD4	Q9NXE4	827 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	TCAF1	Q9Y4C2	921 aa		7.33	□□□□□ -1.24
TRA2A-210	ENST00000497730	TBKBP1	A7MCY6	615 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	PJA2	O43164	708 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	ALDH2	P05091	517 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	HIBADH	P31937	336 aa	Known RBP	7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	MAP2K6	P52564	334 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	CLRN1	P58418	232 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	TLE1	Q04724	770 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	NOG	Q13253	232 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	ATP2B3	Q16720	1220 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	BMT2	Q1RMZ1	405 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	HSP90AB2P	Q58FF8	381 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	ZNF529	Q6P280	563 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	MAMDC4	Q6UXC1	1216 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	ZBTB34	Q8NCN2	500 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	PPP1R35	Q8TAP8	253 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	RUNDC1	Q96C34	613 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	DMRTA2	Q96SC8	542 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	C11orf54	Q9H0W9	315 aa	Predicted RBP	7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	MAN1C1	Q9NR34	630 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	POGK	Q9P215	609 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	SLC23A1	Q9UHI7	598 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	CNOT11	Q9UKZ1	510 aa	Known RBP	7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	JAG2	Q9Y219	1238 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	POLH	Q9Y253	713 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	PCDHA3	Q9Y5H8	950 aa		7.32	□□□□□ -1.24
TRA2A-210	ENST00000497730	TCRBV7S2A1N4T	A0A589	114 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	KIAA0391	O15091	583 aa	Known RBP	7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	SLC16A6	O15403	523 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	CD1A	P06126	327 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	SMARCA1	P28370	1054 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	SELENOP	P49908	381 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	OTUD7B	Q6GQQ9	843 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	EFCAB12	Q6NXP0	572 aa		7.31	□□□□□ -1.24
TRA2A-210	ENST00000497730	UBE3B	Q7Z3V4	1068 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms