RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 GBP3Q9H0R5 595 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 HPSEQ9Y251 543 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 CITO14578 2027 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 MYL1P05976 194 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 THP07101 528 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 NMT1P30419 496 aaKnown RBP12.53□□□□□ -0.4
HLA-B-254ENST00000497377 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
HLA-B-254ENST00000497377 SYKP43405 635 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 SLC11A1P49279 550 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 ASIC1P78348 528 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 CAMK1Q14012 370 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 SLFN12LQ6IEE8 588 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 ZBTB33Q86T24 672 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 PPM1EQ8WY54 764 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 IGSF21Q96ID5 467 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 STRA6Q9BX79 667 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 NGRNQ9NPE2 291 aaKnown RBP12.53□□□□□ -0.4
HLA-B-254ENST00000497377 KLK14Q9P0G3 267 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 ANKFY1Q9P2R3 1169 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 COG5Q9UP83 839 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
HLA-B-254ENST00000497377 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.53□□□□□ -0.4
HLA-B-254ENST00000497377 MYO7AQ13402 2215 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 A0A1B0GVL5 298 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 NRP1O14786 923 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.41
HLA-B-254ENST00000497377 GCNT3O95395 438 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 CLTAP09496 248 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 DNAJB1P25685 340 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 PBX3P40426 434 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 COASYQ13057 564 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 TUSC3Q13454 348 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 POSTNQ15063 836 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
HLA-B-254ENST00000497377 ZC2HC1CQ53FD0 456 aaPredicted RBP12.52□□□□□ -0.41
HLA-B-254ENST00000497377 XKR4Q5GH76 650 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.41
HLA-B-254ENST00000497377 UNC13DQ70J99 1090 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 DDX53Q86TM3 631 aaKnown RBP12.52□□□□□ -0.41
HLA-B-254ENST00000497377 FSIP1Q8NA03 581 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 STAMQ92783 540 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 ZBTB45Q96K62 511 aaPredicted RBP12.52□□□□□ -0.41
HLA-B-254ENST00000497377 ACCSQ96QU6 501 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 TSPAN18Q96SJ8 248 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 COLEC11Q9BWP8 271 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 PLEKHA5Q9HAU0 1116 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 MIOSQ9NXC5 875 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 THEGQ9P2T0 379 aa12.52□□□□□ -0.41
HLA-B-254ENST00000497377 TRIP11Q15643 1979 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 A0A0B4J269 797 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 NT5C1B-RDH14C9J2C7 533 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 PTGESO14684 152 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 FSCN2O14926 492 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 OGTO15294 1046 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 EIF3DO15371 548 aaKnown RBP eCLIP12.51□□□□□ -0.41
HLA-B-254ENST00000497377 B4GALT3O60512 393 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 KCNE1P15382 129 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 OR1G1P47890 313 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 NDUFA8P51970 172 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 POU5F1Q01860 360 aaKnown RBP12.51□□□□□ -0.41
HLA-B-254ENST00000497377 COL19A1Q14993 1142 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 AAK1Q2M2I8 961 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 TCEAL5Q5H9L2 206 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 TMC7Q7Z402 723 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 CEP120Q8N960 986 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
HLA-B-254ENST00000497377 HLA-CQ95604 372 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 SNX27Q96L92 541 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 UROC1Q96N76 676 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
HLA-B-254ENST00000497377 TCF25Q9BQ70 676 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 TBC1D7Q9P0N9 293 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 CNTN3Q9P232 1028 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
HLA-B-254ENST00000497377 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
HLA-B-254ENST00000497377 IRS1P35568 1242 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 AFMP43652 599 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 ERVFC1P60507 584 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 OSTNP61366 133 aa12.5□□□□□ -0.41
HLA-B-254ENST00000497377 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
HLA-B-254ENST00000497377 FAM26FQ5R3K3 315 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms