RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
CMSS1-208ENST00000496116 NR2E1Q9Y466 385 aa11.88□□□□□ -0.51
CMSS1-208ENST00000496116 TELO2Q9Y4R8 837 aa11.88□□□□□ -0.51
CMSS1-208ENST00000496116 STYXL1Q9Y6J8 313 aa11.88□□□□□ -0.51
CMSS1-208ENST00000496116 WDR90Q96KV7 1748 aa11.88□□□□□ -0.51
CMSS1-208ENST00000496116 LCTP09848 1927 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 K7ERI5 159 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PODXLO00592 558 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 EIF3HO15372 352 aaKnown RBP eCLIP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 NR1D1P20393 614 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PEX5P50542 639 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 ALDH5A1P51649 535 aaPredicted RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 CLEC16AQ2KHT3 1053 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 DNAJC21Q5F1R6 531 aaKnown RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 EMC10Q5UCC4 262 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 SEPT14Q6ZU15 432 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 TMC3Q7Z5M5 1100 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 EFCAB13Q8IY85 973 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 GPC2Q8N158 579 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 DHX38Q92620 1227 aaKnown RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 CD101Q93033 1021 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 TMEM143Q96AN5 459 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 TRIM11Q96F44 468 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 TRIM51Q9BSJ1 452 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 ERVK-5Q9HDB9 667 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 SSC5DA1L4H1 1573 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PIGRP01833 764 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 MYBL1P10243 752 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 RFC5P40937 340 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PIK3CAP42336 1068 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 DRG2P55039 364 aaKnown RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 RWDD2BP57060 319 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 BIRC3Q13489 604 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PRKG1Q13976 671 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 ZACNQ401N2 412 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 DUPD1Q68J44 220 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 LBX2Q6XYB7 198 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 JAMLQ86YT9 394 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 SH2D3CQ8N5H7 860 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 ARFGAP2Q8N6H7 521 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PI4K2AQ9BTU6 479 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 TRIM31Q9BZY9 425 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 NRBP2Q9NSY0 501 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PCYOX1Q9UHG3 505 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 RSPH14Q9UHP6 348 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 PCDHA3Q9Y5H8 950 aa11.87□□□□□ -0.51
CMSS1-208ENST00000496116 ZNFX1Q9P2E3 1918 aaKnown RBP11.87□□□□□ -0.51
CMSS1-208ENST00000496116 ATP4AP20648 1035 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 GLRA2P23416 452 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 ARL2P36404 184 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 MARCKSL1P49006 195 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 CNTN2Q02246 1040 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 DHX9Q08211 1270 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 TMEM132AQ24JP5 1023 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 RIOX2Q8IUF8 465 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 MAGOHBQ96A72 148 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 PARP2Q9UGN5 583 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 IGKV6D-21A0A0A0MT36 114 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 H0YGN5 161 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 GRIN3BO60391 1043 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 HLA-DRAP01903 254 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 PYGMP11217 842 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 UNGP13051 313 aaPredicted RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 UBA1P22314 1058 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 COPB2P35606 906 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 ACOT2P49753 483 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 NEDD9Q14511 834 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 TDRD10Q5VZ19 366 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 AADACL2Q6P093 401 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 CCDC137Q6PK04 289 aaKnown RBP11.86□□□□□ -0.51
CMSS1-208ENST00000496116 SRLQ86TD4 932 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 ASAP3Q8TDY4 903 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 GLG1Q92896 1179 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 MSTO1Q9BUK6 570 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 CENPHQ9H3R5 247 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 NFS1Q9Y697 457 aa11.86□□□□□ -0.51
CMSS1-208ENST00000496116 SIP14410 1827 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 GRIN2DO15399 1336 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 MAPK4P31152 587 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 FLT3P36888 993 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 SLC1A1P43005 524 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms