RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	COLEC11	Q9BWP8	271 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	TLE6	Q9H808	572 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	UBE2Z	Q9H832	354 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	OLFML3	Q9NRN5	406 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	GDA	Q9Y2T3	454 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	UNC80	Q8N2C7	3258 aa		13.54	□□□□□ -0.24
MRPL55-233	ENST00000495899	NLRC5	Q86WI3	1866 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	FRMD3	A2A2Y4	597 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	PTGES	O14684	152 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	POLR2D	O15514	142 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	NMT1	P30419	496 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	OR1G1	P47890	313 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	LIG4	P49917	911 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	ADAM15	Q13444	863 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	SMC1A	Q14683	1233 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	LEXM	Q3ZCV2	418 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	XKR4	Q5GH76	650 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	ALKAL1	Q6UXT8	129 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	ZBTB33	Q86T24	672 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	TMEM173	Q86WV6	379 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	MAP4K3	Q8IVH8	894 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	VPS52	Q8N1B4	723 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	EFHB	Q8N7U6	833 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	DHX58	Q96C10	678 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	BICD1	Q96G01	975 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	ACAP3	Q96P50	834 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	ENTPD7	Q9NQZ7	604 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	KCNH3	Q9ULD8	1083 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	IRAK3	Q9Y616	596 aa		13.53	□□□□□ -0.24
MRPL55-233	ENST00000495899	HNRNPDL	O14979	420 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	CXCL14	O95715	111 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	EFEMP2	O95967	443 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	CTSA	P10619	480 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	IDE	P14735	1019 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	NRIP1	P48552	1158 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	TFF2	Q03403	129 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	ALCAM	Q13740	583 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	DUSP6	Q16828	381 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	PUS10	Q3MIT2	529 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	SLFN12L	Q6IEE8	588 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	ADGRD2	Q7Z7M1	963 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	SFR1	Q86XK3	245 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	CCDC65	Q8IXS2	484 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	ZBTB45	Q96K62	511 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	C7orf25	Q9BPX7	421 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	STRA6	Q9BX79	667 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	TRIM9	Q9C026	710 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	ZBP1	Q9H171	429 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	IGFLR1	Q9H665	355 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	MRPL44	Q9H9J2	332 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	SLC38A7	Q9NVC3	462 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	PANK4	Q9NVE7	773 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	CLDND1	Q9NY35	253 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	ANKFY1	Q9P2R3	1169 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899	SSX2IP	Q9Y2D8	614 aa		13.52	□□□□□ -0.25
MRPL55-233	ENST00000495899		A0A0B4J269	797 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	SMIM28	A0A1B0GU29	152 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	C2orf71	A6NGG8	1288 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	CSPG5	O95196	566 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	CLTA	P09496	248 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	SLFN14	P0C7P3	912 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	BMP1	P13497	986 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	KCNE1	P15382	129 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	KCNA5	P22460	613 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	MATR3	P43243	847 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	NAB2	Q15742	525 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	PLPP4	Q5VZY2	271 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	TMEM184A	Q6ZMB5	413 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	RBM23	Q86U06	439 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	GPR65	Q8IYL9	337 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	CEP120	Q8N960	986 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	UROC1	Q96N76	676 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	PPP1R10	Q96QC0	940 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	TSPAN18	Q96SJ8	248 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	PLEKHA5	Q9HAU0	1116 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	MARCH5	Q9NX47	278 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	USP25	Q9UHP3	1055 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	EXOC7	Q9UPT5	735 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	PCDHGC5	Q9Y5F6	944 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	STYXL1	Q9Y6J8	313 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	XIRP2	A4UGR9	3374 aa		13.51	□□□□□ -0.25
MRPL55-233	ENST00000495899	FAM237A	A0A1B0GTK4	181 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899		A0A1W2PQ27	194 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899		A0A1W2PQ64	194 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899		A0A1W2PQD8	194 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	HIDE1	A8MVS5	230 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	PER2	O15055	1255 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	TADA2A	O75478	443 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	SOD2	P04179	222 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	SRGAP2B	P0DMP2	458 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	LTBR	P36941	435 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	OSTN	P61366	133 aa		13.5	□□□□□ -0.25
MRPL55-233	ENST00000495899	POU5F1	Q01860	360 aa	Known RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms