RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 CHST12Q9NRB3 414 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 AURKAIP1Q9NWT8 199 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-207ENST00000495817 FAM227AF5H4B4 570 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 NBPF7P0C2Y1 421 aaPredicted RBP7.39□□□□□ -1.23
CCDC39-207ENST00000495817 RHCEP18577 417 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 CTSSP25774 331 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 RHDQ02161 417 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 OS9Q13438 667 aaPredicted RBP7.39□□□□□ -1.23
CCDC39-207ENST00000495817 ZXDCQ2QGD7 858 aaPredicted RBP7.39□□□□□ -1.23
CCDC39-207ENST00000495817 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 COBLL1Q53SF7 1204 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 THEMIS2Q5TEJ8 643 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 DPF2Q92785 391 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 HOXB13Q92826 284 aaPredicted RBP7.39□□□□□ -1.23
CCDC39-207ENST00000495817 TMEM176AQ96HP8 235 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 C7orf25Q9BPX7 421 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 USP25Q9UHP3 1055 aa7.39□□□□□ -1.23
CCDC39-207ENST00000495817 PLEKHD1A6NEE1 506 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 A6NNZ2 444 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 TPP1O14773 563 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 SLC16A6O15403 523 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 SGTAO43765 313 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 UBXN7O94888 489 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 ENDOD1O94919 500 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 ACRV1P26436 265 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 PICALMQ13492 652 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 BRD3Q15059 726 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 NOMO1Q15155 1222 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 TTC7BQ86TV6 843 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 PALM2Q8IXS6 379 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 OR2I1PQ8NGU4 316 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC39-207ENST00000495817 SNX33Q8WV41 574 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 ARL8AQ96BM9 186 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 KMT5AQ9NQR1 393 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 TLR9Q9NR96 1032 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.38□□□□□ -1.23
CCDC39-207ENST00000495817 COMMD10Q9Y6G5 202 aa7.38□□□□□ -1.23
CCDC39-207ENST00000495817 CAPN14A8MX76 684 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 B3GALT2O43825 422 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 AKR1B10O60218 316 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 IPO13O94829 963 aaKnown RBP7.37□□□□□ -1.23
CCDC39-207ENST00000495817 GYPEP15421 78 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 DSC2Q02487 901 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 DUSP2Q05923 314 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 SEPT2Q15019 361 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 ACAP1Q15027 740 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 FKBP15Q5T1M5 1219 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 SGMS1Q86VZ5 419 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 KIAA0319LQ8IZA0 1049 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 ZNF808Q8N4W9 903 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-207ENST00000495817 PPP1R35Q8TAP8 253 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 MIEF2Q96C03 454 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 KRTAP4-9Q9BYQ8 210 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 ING3Q9NXR8 418 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 SH3BP1Q9Y3L3 701 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 RIPOR2Q9Y4F9 1068 aa7.37□□□□□ -1.23
CCDC39-207ENST00000495817 ALDH2P05091 517 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 FAM193AP78312 1265 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 IL10RAQ13651 578 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 UBE3CQ15386 1083 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 MST1LQ2TV78 715 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 SPDYAQ5MJ70 313 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 APBB1IPQ7Z5R6 666 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-207ENST00000495817 MORC4Q8TE76 937 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 NSUN6Q8TEA1 469 aaKnown RBP7.36□□□□□ -1.23
CCDC39-207ENST00000495817 ZNF512Q96ME7 567 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-207ENST00000495817 CGRRF1Q99675 332 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 ENKD1Q9H0I2 346 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 MANSC1Q9H8J5 431 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 NCDNQ9UBB6 729 aa7.36□□□□□ -1.23
CCDC39-207ENST00000495817 APAF1O14727 1248 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 PRAMEF4O60810 478 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 INSRRP14616 1297 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 HTR1BP28222 390 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 ECHS1P30084 290 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 HIBADHP31937 336 aaKnown RBP7.35□□□□□ -1.23
CCDC39-207ENST00000495817 AGFG1P52594 562 aaKnown RBP7.35□□□□□ -1.23
CCDC39-207ENST00000495817 ELAVL1Q15717 326 aaKnown RBP7.35□□□□□ -1.23
CCDC39-207ENST00000495817 VPS72Q15906 364 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 ANO6Q4KMQ2 910 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 IL31Q6EBC2 164 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 ABHD15Q6UXT9 468 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 DRC7Q8IY82 874 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
CCDC39-207ENST00000495817 SH3RF3Q8TEJ3 882 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-207ENST00000495817 KAT5Q92993 513 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 CYFIP2Q96F07 1278 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 MPHOSPH6Q99547 160 aaKnown RBP7.35□□□□□ -1.23
CCDC39-207ENST00000495817 POLR3GLQ9BT43 218 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 LRFN3Q9BTN0 628 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 MYH16Q9H6N6 1097 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 L1RE1Q9UN81 338 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 POLHQ9Y253 713 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 STXBP5LQ9Y2K9 1186 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 PCDHB1Q9Y5F3 818 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 PCDHA13Q9Y5I0 950 aa7.35□□□□□ -1.23
CCDC39-207ENST00000495817 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
CCDC39-207ENST00000495817 EIF3JO75822 258 aaKnown RBP7.34□□□□□ -1.23
CCDC39-207ENST00000495817 GASTP01350 101 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms