RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 PSMD5Q16401 504 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 XKR9Q5GH70 373 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 AXDND1Q5T1B0 1012 aaPredicted RBP14.93□□□□□ -0.02
COL1A1-209ENST00000495677 FAM171A1Q5VUB5 890 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 TSSK4Q6SA08 328 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 ELSPBP1Q96BH3 223 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 KXD1Q9BQD3 176 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 PAAF1Q9BRP4 392 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 LXNQ9BS40 222 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 CHRDQ9H2X0 955 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 ZSWIM4Q9H7M6 989 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 ZFHX4Q86UP3 3567 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 CHD8Q9HCK8 2581 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 USP24Q9UPU5 2620 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 GCFC2P16383 781 aaKnown RBP14.92□□□□□ -0.02
COL1A1-209ENST00000495677 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
COL1A1-209ENST00000495677 ARL2P36404 184 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 MTAPQ13126 283 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 PABPC1LQ4VXU2 614 aaKnown RBP14.92□□□□□ -0.02
COL1A1-209ENST00000495677 BLOC1S2Q6QNY1 142 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 TRIM22Q8IYM9 498 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 SLC7A14Q8TBB6 771 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 APOL6Q9BWW8 343 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-209ENST00000495677 RAB23Q9ULC3 237 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 POLIQ9UNA4 740 aa14.92□□□□□ -0.02
COL1A1-209ENST00000495677 ZBTB39O15060 712 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 FOXD2O60548 495 aaPredicted RBP14.91□□□□□ -0.02
COL1A1-209ENST00000495677 DGAT1O75907 488 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 MICAL2O94851 1124 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 SLITRK3O94933 977 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 LYPLA2O95372 231 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 DEXIO95424 95 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 THP07101 528 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 CPA1P15085 419 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
COL1A1-209ENST00000495677 SPEM2Q0P670 501 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 CAPSQ13938 189 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 NAB2Q15742 525 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 INF2Q27J81 1249 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 PPM1JQ5JR12 505 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 KRT25Q7Z3Z0 450 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 CEP57Q86XR8 500 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 DDX1Q92499 740 aaKnown RBP14.91□□□□□ -0.02
COL1A1-209ENST00000495677 RABGGTAQ92696 567 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 HAS1Q92839 578 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 PRIMPOLQ96LW4 560 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 PLA2G2FQ9BZM2 168 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 HEBP1Q9NRV9 189 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 HCFC1R1Q9NWW0 138 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 KLK14Q9P0G3 267 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 MTRRQ9UBK8 725 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 PARP2Q9UGN5 583 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 CITO14578 2027 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 CHD6Q8TD26 2715 aa14.91□□□□□ -0.02
COL1A1-209ENST00000495677 TMEM189-UBE2V1I3L0A0 370 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 ADAM12O43184 909 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 KIF4AO95239 1232 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 NPTXRO95502 500 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 FGFR3P22607 806 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 RPS6KB1P23443 525 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 CNR2P34972 360 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 OR1D2P34982 312 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 CCR3P51677 355 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 MLLT6P55198 1093 aaPredicted RBP14.9□□□□□ -0.02
COL1A1-209ENST00000495677 SPIRE1Q08AE8 756 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 CSRP2Q16527 193 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 FAM187BQ17R55 369 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 TANGO2Q6ICL3 276 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 POTEHQ6S545 545 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.9□□□□□ -0.02
COL1A1-209ENST00000495677 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 DYDC2Q96IM9 177 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 NAP1L4Q99733 375 aaKnown RBP14.9□□□□□ -0.02
COL1A1-209ENST00000495677 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
COL1A1-209ENST00000495677 ANKEF1Q9NU02 776 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 MRPS23Q9Y3D9 190 aaKnown RBP14.9□□□□□ -0.02
COL1A1-209ENST00000495677 BACE2Q9Y5Z0 518 aa14.9□□□□□ -0.02
COL1A1-209ENST00000495677 ARHGEF37A1IGU5 675 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 PTGESO14684 152 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 RHOP08100 348 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 PTPN2P17706 415 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 GLRA2P23416 452 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 HSPA4P34932 840 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 RBM25P49756 843 aaKnown RBP14.89□□□□□ -0.03
COL1A1-209ENST00000495677 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
COL1A1-209ENST00000495677 NEK8Q86SG6 692 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 MCRS1Q96EZ8 462 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 CHAMP1Q96JM3 812 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 JAKMIP1Q96N16 626 aaKnown RBP14.89□□□□□ -0.03
COL1A1-209ENST00000495677 SEMA4GQ9NTN9 838 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 CACNG4Q9UBN1 327 aa14.89□□□□□ -0.03
COL1A1-209ENST00000495677 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.89□□□□□ -0.03
COL1A1-209ENST00000495677 CACNA1GO43497 2377 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
COL1A1-209ENST00000495677 B4GALT5O43286 388 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms