RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-214ENST00000495485 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 NME8Q8N427 588 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 RNF10Q8N5U6 811 aaKnown RBP11.09□□□□□ -0.63
HDAC3-214ENST00000495485 METTL13Q8N6R0 699 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 ACRBPQ8NEB7 543 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 FBXL13Q8NEE6 735 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 TCHPQ9BT92 498 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDAC3-214ENST00000495485 MSTO1Q9BUK6 570 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 KIFC3Q9BVG8 833 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 TMEM39AQ9NV64 488 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 ARHGAP20Q9P2F6 1191 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 DNAJC12Q9UKB3 198 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 TBX21Q9UL17 535 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 PCDHA13Q9Y5I0 950 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
HDAC3-214ENST00000495485 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 GOLGA8IPA6NC78 632 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 GOLGA8JA6NMD2 632 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 EPHB6O15197 1021 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 URI1O94763 535 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SLU7O95391 586 aaKnown RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 PRKCBP05771 671 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 PFKMP08237 780 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 TRIM49P0CI25 452 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 TRIM49CP0CI26 452 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 INSRRP14616 1297 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 KLRC1P26715 233 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 ADSSP30520 456 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 GTF2F1P35269 517 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SOX5P35711 763 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 ADAM17P78536 824 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 PSMD6Q15008 389 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SLC18A3Q16572 532 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 PTGISQ16647 500 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 ZNF569Q5MCW4 686 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SERINC5Q86VE9 423 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 MNS1Q8NEH6 495 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SECISBP2LQ93073 1101 aaKnown RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 SAAL1Q96ER3 474 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 LBHD1Q9BQE6 289 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 IMPG2Q9BZV3 1241 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 INO80BQ9C086 356 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-214ENST00000495485 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 GUCA1BQ9UMX6 200 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 FHOD1Q9Y613 1164 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
HDAC3-214ENST00000495485 LAMA2P24043 3122 aaKnown RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 A0A0B4J269 797 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 A0A1W2PPC1 479 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 INO80B-WBP1J3KQ70 363 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 ACKR2O00590 384 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 OGTO15294 1046 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 B4GALT4O60513 344 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 TIMP1P01033 207 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 ACTN1P12814 892 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 TNNI1P19237 187 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 GCLMP48507 274 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 GPC3P51654 580 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 JAM2P57087 298 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 PTENP60484 403 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 DRAP1Q14919 205 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 GRIK4Q16099 956 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 FAM187BQ17R55 369 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 EPC2Q52LR7 807 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 SRGAP1Q7Z6B7 1085 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 ZNF410Q86VK4 478 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 CBWD2Q8IUF1 395 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 C7orf61Q8IZ16 206 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 TMEM199Q8N511 208 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 LMBR1Q8WVP7 490 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 CCDC127Q96BQ5 260 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-214ENST00000495485 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
HDAC3-214ENST00000495485 RBAKQ9NYW8 714 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms