RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 GGPS1O95749 300 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 FGBP02675 491 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 PBX2P40425 430 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 STAT5BP51692 787 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 CELF3Q5SZQ8 465 aaKnown RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 PAPD7Q5XG87 772 aaKnown RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 TCP11Q8WWU5 503 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 BBXQ8WY36 941 aaPredicted RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 UBXN4Q92575 508 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 EMID1Q96A84 441 aaPredicted RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 INTS2Q9H0H0 1204 aaKnown RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 MTIF3Q9H2K0 278 aaKnown RBP17.61■□□□□ 0.41
CBX4-204ENST00000495122 TMEM134Q9H6X4 195 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 GPRC5CQ9NQ84 441 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 APEX2Q9UBZ4 518 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 INTUQ9ULD6 942 aa17.61■□□□□ 0.41
CBX4-204ENST00000495122 TMEM150BA6NC51 233 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 ZNF263O14978 683 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 FOSL2P15408 326 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 PRLRP16471 622 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 ARL2P36404 184 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 STRN3Q13033 797 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
CBX4-204ENST00000495122 MTERF2Q49AM1 385 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 SRGAP1Q7Z6B7 1085 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 SESTD1Q86VW0 696 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 RPUSD2Q8IZ73 545 aaKnown RBP17.6■□□□□ 0.41
CBX4-204ENST00000495122 MAFAQ8NHW3 353 aaPredicted RBP17.6■□□□□ 0.41
CBX4-204ENST00000495122 KAT2BQ92831 832 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 CEP89Q96ST8 783 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 ZNF576Q9H609 170 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 FHOD1Q9Y613 1164 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 STYXL1Q9Y6J8 313 aa17.6■□□□□ 0.41
CBX4-204ENST00000495122 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 MAFO75444 373 aaPredicted RBP17.59■□□□□ 0.41
CBX4-204ENST00000495122 TUBBP07437 444 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 PFKMP08237 780 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 PLEKP08567 350 aaPredicted RBP17.59■□□□□ 0.41
CBX4-204ENST00000495122 ATP4AP20648 1035 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 SOX5P35711 763 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 EFNA5P52803 228 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 AMPD2Q01433 879 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 GRIN2CQ14957 1233 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 IFI16Q16666 785 aaKnown RBP17.59■□□□□ 0.41
CBX4-204ENST00000495122 OTOP2Q7RTS6 562 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.59■□□□□ 0.41
CBX4-204ENST00000495122 UBE2Q2Q8WVN8 375 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 RABGGTAQ92696 567 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 GOLGA1Q92805 767 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 CALR3Q96L12 384 aaKnown RBP17.59■□□□□ 0.41
CBX4-204ENST00000495122 MFSD14AQ96MC6 490 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 CBWD1Q9BRT8 395 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 CARD6Q9BX69 1037 aa17.59■□□□□ 0.41
CBX4-204ENST00000495122 IRX2Q9BZI1 471 aaPredicted RBP17.59■□□□□ 0.41
CBX4-204ENST00000495122 A0A0U1RQJ8 604 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 RRP9O43818 475 aaKnown RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 LDHAP00338 332 aaKnown RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 ACTN1P12814 892 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 TCF7P36402 384 aaPredicted RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 MXI1P50539 228 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 CYP27A1Q02318 531 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 SP4Q02446 784 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 CKAP4Q07065 602 aaKnown RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 RAB30Q15771 203 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 SNRNP35Q16560 246 aaKnown RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 EPC2Q52LR7 807 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 IER5Q5VY09 327 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 IQCEQ6IPM2 695 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 TRAPPC11Q7Z392 1133 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 GPD1LQ8N335 351 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 GPR161Q8N6U8 529 aaKnown RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 ATRIPQ8WXE1 791 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 BSNDQ8WZ55 320 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 NOX5Q96PH1 765 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 PCYT2Q99447 389 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 GPR20Q99678 358 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 LACRTQ9GZZ8 138 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 ARGLU1Q9NWB6 273 aaPredicted RBP17.58■□□□□ 0.4
CBX4-204ENST00000495122 COQ4Q9Y3A0 265 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 VCANP13611 3396 aa17.58■□□□□ 0.4
CBX4-204ENST00000495122 F8VZ95 297 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 NOP56O00567 594 aaKnown RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
CBX4-204ENST00000495122 F2P00734 622 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 RFC2P35250 354 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 LAMC2Q13753 1193 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 MXD4Q14582 209 aaPredicted RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 NAB2Q15742 525 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 DGKDQ16760 1214 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 CBWD6Q4V339 395 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms