RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CXCL16Q9H2A7 254 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 BHMT2Q9H2M3 363 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 LRWD1Q9UFC0 647 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 CFHP08603 1231 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 HNRNPA1P09651 372 aaKnown RBP eCLIP25.59■■□□□ 1.69
COL27A1-208ENST00000494780 SRFP11831 508 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 PDIA5Q14554 519 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 GET4Q7L5D6 327 aaPredicted RBP25.59■■□□□ 1.69
COL27A1-208ENST00000494780 APBB1IPQ7Z5R6 666 aaPredicted RBP25.59■■□□□ 1.69
COL27A1-208ENST00000494780 CCDC105Q8IYK2 499 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 KIFC3Q9BVG8 833 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 SH2B1Q9NRF2 756 aaPredicted RBP25.59■■□□□ 1.69
COL27A1-208ENST00000494780 KIAA1024Q9UPX6 916 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 GDAQ9Y2T3 454 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 ZFP37Q9Y6Q3 630 aaPredicted RBP25.59■■□□□ 1.69
COL27A1-208ENST00000494780 DOCK8Q8NF50 2099 aa25.59■■□□□ 1.69
COL27A1-208ENST00000494780 NT5DC1Q5TFE4 455 aa25.58■■□□□ 1.69
COL27A1-208ENST00000494780 LIN9Q5TKA1 542 aa25.58■■□□□ 1.69
COL27A1-208ENST00000494780 ATF7IP2Q5U623 682 aa25.58■■□□□ 1.69
COL27A1-208ENST00000494780 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.58■■□□□ 1.69
COL27A1-208ENST00000494780 ANHXE9PGG2 379 aa25.57■■□□□ 1.68
COL27A1-208ENST00000494780 TMEM189-UBE2V1I3L0A0 370 aa25.57■■□□□ 1.68
COL27A1-208ENST00000494780 RAB34Q9BZG1 259 aa25.57■■□□□ 1.68
COL27A1-208ENST00000494780 POLD4Q9HCU8 107 aa25.57■■□□□ 1.68
COL27A1-208ENST00000494780 DDX19AQ9NUU7 478 aaKnown RBP25.57■■□□□ 1.68
COL27A1-208ENST00000494780 KRBA1A5PL33 1030 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 K7ERI5 159 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 FSHRP23945 695 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 U2AF2P26368 475 aaKnown RBP eCLIP25.56■■□□□ 1.68
COL27A1-208ENST00000494780 HOXA9P31269 272 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 NBR1Q14596 966 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 PPM1LQ5SGD2 360 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 IGSF22Q8N9C0 903 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 DTWD2Q8NBA8 298 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 SNX29Q8TEQ0 813 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 UROC1Q96N76 676 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 PPP1R10Q96QC0 940 aaKnown RBP25.56■■□□□ 1.68
COL27A1-208ENST00000494780 TNFSF13BQ9Y275 285 aa25.56■■□□□ 1.68
COL27A1-208ENST00000494780 USP34Q70CQ2 3546 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 C8AP07357 584 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 FGFR3P22607 806 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 PTGDRQ13258 359 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 HTR4Q13639 388 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 DCLRE1AQ6PJP8 1040 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 ASCL5Q7RTU5 278 aa25.55■■□□□ 1.68
COL27A1-208ENST00000494780 GRASPQ7Z6J2 395 aaPredicted RBP25.55■■□□□ 1.68
COL27A1-208ENST00000494780 PRR23AA6NEV1 266 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 STK25O00506 426 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 ADAM12O43184 909 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 B3GAT3O94766 335 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 RFX1P22670 979 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 RAB33AQ14088 237 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 GLRA4Q5JXX5 417 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 MTRRQ9UBK8 725 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 CA14Q9ULX7 337 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 DNM3Q9UQ16 869 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 NUMBLQ9Y6R0 609 aa25.54■■□□□ 1.68
COL27A1-208ENST00000494780 LAD1O00515 517 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 XYLBO75191 536 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 POU2F2P09086 479 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 TOB1P50616 345 aaPredicted RBP25.53■■□□□ 1.68
COL27A1-208ENST00000494780 CLCNKBP51801 687 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 ANGPT1Q15389 498 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 UVSSAQ2YD98 709 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 FRMD5Q7Z6J6 570 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 GPR152Q8TDT2 470 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 TMEM134Q9H6X4 195 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 SLC2A4RGQ9NR83 387 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 CDH7Q9ULB5 785 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 PCDHB6Q9Y5E3 794 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 PHLPP2Q6ZVD8 1323 aa25.53■■□□□ 1.68
COL27A1-208ENST00000494780 CCDC169A6NNP5 214 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 TRAPPC3O43617 180 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 OR1D2P34982 312 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 GRM5P41594 1212 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 NPTX2P47972 431 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 YARSP54577 528 aaKnown RBP25.52■■□□□ 1.68
COL27A1-208ENST00000494780 PEX3P56589 373 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 UPP1Q16831 310 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 KRT79Q5XKE5 535 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 RTL10Q7L3V2 364 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 NKD2Q969F2 451 aaPredicted RBP25.52■■□□□ 1.68
COL27A1-208ENST00000494780 KIF2CQ99661 725 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 ACO2Q99798 780 aaKnown RBP25.52■■□□□ 1.68
COL27A1-208ENST00000494780 CCDC94Q9BW85 323 aaPredicted RBP25.52■■□□□ 1.68
COL27A1-208ENST00000494780 TBC1D17Q9HA65 648 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 TOPORSQ9NS56 1045 aaPredicted RBP25.52■■□□□ 1.68
COL27A1-208ENST00000494780 VWA8A3KMH1 1905 aa25.52■■□□□ 1.68
COL27A1-208ENST00000494780 SMIM28A0A1B0GU29 152 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 E9PMD0 336 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 CCL16O15467 120 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 PRPHP41219 470 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 NTHL1P78549 312 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 DMP1Q13316 513 aaPredicted RBP25.51■■□□□ 1.67
COL27A1-208ENST00000494780 XKR4Q5GH76 650 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 AXDND1Q5T1B0 1012 aaPredicted RBP25.51■■□□□ 1.67
COL27A1-208ENST00000494780 PHLDB3Q6NSJ2 640 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 CD300LGQ6UXG3 332 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 DAW1Q8N136 415 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 SLC7A14Q8TBB6 771 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms