RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 LENG9Q96B70 501 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 COA7Q96BR5 231 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 MNTQ99583 582 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 NRDE2Q9H7Z3 1164 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 ANLNQ9NQW6 1124 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 ING3Q9NXR8 418 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 LIMCH1Q9UPQ0 1083 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 PCDHA13Q9Y5I0 950 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 CCDC154A6NI56 674 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 RFPL1O75677 317 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 SEC24DO94855 1032 aaPredicted RBP5.76□□□□□ -1.49
SMC4-224ENST00000494612 FSBPO95073 299 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 PTGS2P35354 604 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 KRT85P78386 507 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 MALLQ13021 153 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 IL10RAQ13651 578 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 FKBP15Q5T1M5 1219 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 MSL3Q8N5Y2 521 aaKnown RBP5.76□□□□□ -1.49
SMC4-224ENST00000494612 FBXO18Q8NFZ0 1043 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 OR2I1PQ8NGU4 316 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 TTC8Q8TAM2 541 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 SLC25A43Q8WUT9 341 aaPredicted RBP5.76□□□□□ -1.49
SMC4-224ENST00000494612 GREM2Q9H772 168 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 TCF7L1Q9HCS4 588 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 NCDNQ9UBB6 729 aa5.76□□□□□ -1.49
SMC4-224ENST00000494612 FAM20BO75063 409 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 TMEM127O75204 238 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 TOX4O94842 621 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 GCP02774 474 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 NR4A1P22736 598 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 CTSSP25774 331 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 CYP2C19P33261 490 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 MCAMP43121 646 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 SLC16A1P53985 500 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 PPP3CAQ08209 521 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 MAN2A1Q16706 1144 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 C3orf36Q3SXR2 165 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 RRP12Q5JTH9 1297 aaKnown RBP5.75□□□□□ -1.49
SMC4-224ENST00000494612 NAIF1Q69YI7 327 aaPredicted RBP5.75□□□□□ -1.49
SMC4-224ENST00000494612 EPM2AIP1Q7L775 607 aaPredicted RBP5.75□□□□□ -1.49
SMC4-224ENST00000494612 ELOA2Q8IYF1 753 aaPredicted RBP5.75□□□□□ -1.49
SMC4-224ENST00000494612 TCEAL8Q8IYN2 117 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 GRAMD1CQ8IYS0 662 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 MAGEB6Q8N7X4 407 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 MDGA1Q8NFP4 955 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 KAT5Q92993 513 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 GTPBP4Q9BZE4 634 aaKnown RBP5.75□□□□□ -1.49
SMC4-224ENST00000494612 GABBR1Q9UBS5 961 aa5.75□□□□□ -1.49
SMC4-224ENST00000494612 PNMA8BQ9ULN7 279 aaPredicted RBP5.75□□□□□ -1.49
SMC4-224ENST00000494612 A0A1W2PR48 441 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 VSTM5A8MXK1 200 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 HTRA2O43464 458 aaPredicted RBP5.74□□□□□ -1.49
SMC4-224ENST00000494612 NUDT3O95989 172 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 JUNP05412 331 aaKnown RBP5.74□□□□□ -1.49
SMC4-224ENST00000494612 PDCP20941 246 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 EDNRBP24530 442 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 ADKP55263 362 aaKnown RBP5.74□□□□□ -1.49
SMC4-224ENST00000494612 ANO4Q32M45 955 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 ARHGAP29Q52LW3 1261 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 CCDC178Q5BJE1 867 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 KRT40Q6A162 431 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 MFSD5Q6N075 450 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 VRK3Q8IV63 474 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 RHOT1Q8IXI2 618 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 ZNF276Q8N554 614 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 GPR156Q8NFN8 814 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 GPR150Q8NGU9 434 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 STON2Q8WXE9 905 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 ZNF512Q96ME7 567 aaPredicted RBP5.74□□□□□ -1.49
SMC4-224ENST00000494612 CAMKK2Q96RR4 588 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 OSBPL6Q9BZF3 934 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 LDAHQ9H6V9 325 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 RBM12Q9NTZ6 932 aaKnown RBP5.74□□□□□ -1.49
SMC4-224ENST00000494612 PTGFRNQ9P2B2 879 aa5.74□□□□□ -1.49
SMC4-224ENST00000494612 SAP30BPQ9UHR5 308 aaKnown RBP5.74□□□□□ -1.49
SMC4-224ENST00000494612 GOLGA6L6A8MZA4 724 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 OFD1O75665 1012 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 ALDH1A2O94788 518 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 POU2F2P09086 479 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 LTA4HP09960 611 aaKnown RBP5.73□□□□□ -1.49
SMC4-224ENST00000494612 LPOP22079 712 aaPredicted RBP5.73□□□□□ -1.49
SMC4-224ENST00000494612 PER3P56645 1201 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 SEPT2Q15019 361 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 SLC4A10Q6U841 1118 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 CMTM4Q8IZR5 234 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 PPP1R14CQ8TAE6 165 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 ATXN2LQ8WWM7 1075 aaKnown RBP5.73□□□□□ -1.49
SMC4-224ENST00000494612 SSH1Q8WYL5 1049 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 UHRF1Q96T88 793 aaPredicted RBP5.73□□□□□ -1.49
SMC4-224ENST00000494612 MLST8Q9BVC4 326 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 SLC12A5Q9H2X9 1139 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 SCOCQ9UIL1 159 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 RCAN3Q9UKA8 241 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 FZD1Q9UP38 647 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 RPTORQ8N122 1335 aa5.73□□□□□ -1.49
SMC4-224ENST00000494612 GOLGA6CA6NDK9 693 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 GOLGA6BA6NDN3 693 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 ADCY6O43306 1168 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 MFAP3LO75121 409 aa5.72□□□□□ -1.49
SMC4-224ENST00000494612 GOLGA6DP0CG33 693 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms