RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 SNX27Q96L92 541 aa25.6■■□□□ 1.69
CLIC3-203ENST00000494426 PPP1R10Q96QC0 940 aaKnown RBP25.6■■□□□ 1.69
CLIC3-203ENST00000494426 VN1R3Q9BXE9 311 aa25.6■■□□□ 1.69
CLIC3-203ENST00000494426 NSUN3Q9H649 340 aaKnown RBP25.6■■□□□ 1.69
CLIC3-203ENST00000494426 TLR9Q9NR96 1032 aa25.6■■□□□ 1.69
CLIC3-203ENST00000494426 CACNG4Q9UBN1 327 aa25.6■■□□□ 1.69
CLIC3-203ENST00000494426 MYO7AQ13402 2215 aa25.6■■□□□ 1.69
CLIC3-203ENST00000494426 PDCD11Q14690 1871 aaKnown RBP25.6■■□□□ 1.69
CLIC3-203ENST00000494426 GOLGA6L4A6NEF3 574 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 F8W810 466 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 OGTO15294 1046 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 PRR29P0C7W0 189 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 TUSC3Q13454 348 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 ZNF507Q8TCN5 953 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 TMEM169Q96HH4 297 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 ZMAT2Q96NC0 199 aaKnown RBP25.59■■□□□ 1.69
CLIC3-203ENST00000494426 PAAF1Q9BRP4 392 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 MSTO1Q9BUK6 570 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 TOPORSQ9NS56 1045 aaPredicted RBP25.59■■□□□ 1.69
CLIC3-203ENST00000494426 PUF60Q9UHX1 559 aaKnown RBP25.59■■□□□ 1.69
CLIC3-203ENST00000494426 EXOC7Q9UPT5 735 aa25.59■■□□□ 1.69
CLIC3-203ENST00000494426 PRG3Q9Y2Y8 225 aaPredicted RBP25.59■■□□□ 1.69
CLIC3-203ENST00000494426 GADD45BO75293 160 aaPredicted RBP25.58■■□□□ 1.69
CLIC3-203ENST00000494426 ADGRD2Q7Z7M1 963 aa25.58■■□□□ 1.69
CLIC3-203ENST00000494426 DDX53Q86TM3 631 aaKnown RBP25.58■■□□□ 1.69
CLIC3-203ENST00000494426 RABGGTAQ92696 567 aa25.58■■□□□ 1.69
CLIC3-203ENST00000494426 CNTN3Q9P232 1028 aa25.58■■□□□ 1.69
CLIC3-203ENST00000494426 EFEMP2O95967 443 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 MYL1P05976 194 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 CLTAP09496 248 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 CXCL8P10145 99 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 KCNE1P15382 129 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 KMT5BQ4FZB7 885 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 SLFN12LQ6IEE8 588 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 IPO9Q96P70 1041 aaKnown RBP25.57■■□□□ 1.68
CLIC3-203ENST00000494426 TMEM206Q9H813 350 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 SLC39A2Q9NP94 309 aa25.57■■□□□ 1.68
CLIC3-203ENST00000494426 CPSF3Q9UKF6 684 aaKnown RBP25.57■■□□□ 1.68
CLIC3-203ENST00000494426 TTC26A0AVF1 554 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 CASTOR2A6NHX0 329 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 EIF3DO15371 548 aaKnown RBP eCLIP25.56■■□□□ 1.68
CLIC3-203ENST00000494426 DPYDQ12882 1025 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 STXBP4Q6ZWJ1 553 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 TMEM87AQ8NBN3 555 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 MICAL1Q8TDZ2 1067 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 SCFD1Q8WVM8 642 aa25.56■■□□□ 1.68
CLIC3-203ENST00000494426 AGO2Q9UKV8 859 aaKnown RBP25.56■■□□□ 1.68
CLIC3-203ENST00000494426 ADRB2P07550 413 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 IGFBP6P24592 240 aaPredicted RBP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 GTF2F1P35269 517 aaKnown RBP eCLIP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 FAM160A1Q05DH4 1040 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 SOX4Q06945 474 aaPredicted RBP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 HYAL1Q12794 435 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 STK4Q13043 487 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 ENOX2Q16206 610 aaKnown RBP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 KYAT1Q16773 422 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 PLPP4Q5VZY2 271 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 PDE12Q6L8Q7 609 aaKnown RBP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 CRELD2Q6UXH1 353 aaPredicted RBP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 RNF168Q8IYW5 571 aaPredicted RBP25.55■■□□□ 1.68
CLIC3-203ENST00000494426 SYCP3Q8IZU3 236 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 VPS52Q8N1B4 723 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 ZSWIM2Q8NEG5 633 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 POMGNT1Q8WZA1 660 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 TCF25Q9BQ70 676 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 COLEC11Q9BWP8 271 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 ZBP1Q9H171 429 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 PLEKHA5Q9HAU0 1116 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 ANK1P16157 1881 aa25.55■■□□□ 1.68
CLIC3-203ENST00000494426 HIDE1A8MVS5 230 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 NR1I2O75469 434 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 RPN1P04843 607 aaKnown RBP25.54■■□□□ 1.68
CLIC3-203ENST00000494426 ACOT2P49753 483 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 POSTNQ15063 836 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 SKIV2LQ15477 1246 aaKnown RBP25.54■■□□□ 1.68
CLIC3-203ENST00000494426 TAS1R1Q7RTX1 841 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 TMC7Q7Z402 723 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 GOLGA2P5Q9HBQ8 144 aa25.54■■□□□ 1.68
CLIC3-203ENST00000494426 PRUNE2Q8WUY3 3088 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 LACTBL1A8MY62 500 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 SPAG1Q07617 926 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 HSP90AA2PQ14568 343 aaPredicted RBP25.53■■□□□ 1.68
CLIC3-203ENST00000494426 COL19A1Q14993 1142 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 CD300LGQ6UXG3 332 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 KIAA0895Q8NCT3 520 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 C18orf25Q96B23 403 aaPredicted RBP25.53■■□□□ 1.68
CLIC3-203ENST00000494426 CBWD1Q9BRT8 395 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 RPF1Q9H9Y2 349 aaKnown RBP25.53■■□□□ 1.68
CLIC3-203ENST00000494426 NGRNQ9NPE2 291 aaKnown RBP25.53■■□□□ 1.68
CLIC3-203ENST00000494426 ENTPD7Q9NQZ7 604 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 EXOC1Q9NV70 894 aa25.53■■□□□ 1.68
CLIC3-203ENST00000494426 TGFB1I1O43294 461 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 CTSAP10619 480 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 GARTP22102 1010 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 CLCNKBP51801 687 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 PSMD2Q13200 908 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 ZBTB6Q15916 424 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 BMT2Q1RMZ1 405 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 KANK3Q6NY19 840 aa25.52■■□□□ 1.68
CLIC3-203ENST00000494426 MRPL43Q8N983 215 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms