RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TTC28Q96AY4 2481 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 CYP2D7A0A087X1C5 515 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 GSG1L2A8MUP6 293 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 GOLIM4O00461 696 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 SEPT4O43236 478 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 PRKAB2O43741 272 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 FLOT1O75955 427 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 PGK1P00558 417 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ZGLP1P0C6A0 271 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 AKR1B1P15121 316 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 PDE6AP16499 860 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ANAPC15P60006 121 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 GABREP78334 506 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 GABPAQ06546 454 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 LRRC41Q15345 812 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 FAM47AQ5JRC9 791 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 RALGPS1Q5JS13 557 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 OLFML2BQ68BL8 750 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 RSPO2Q6UXX9 243 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 USP53Q70EK8 1073 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 MAMDC2Q7Z304 686 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 RNF180Q86T96 592 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 FTSJ3Q8IY81 847 aaKnown RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ANKS4BQ8N8V4 417 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 DCAF4Q8WV16 495 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 MYLIPQ8WY64 445 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 PTPRN2Q92932 1015 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 G6PC3Q9BUM1 346 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 CRNKL1Q9BZJ0 848 aaKnown RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 TTYH1Q9H313 450 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ADAMTS10Q9H324 1103 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ARMT1Q9H993 441 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 TRIM39Q9HCM9 518 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 DCP1AQ9NPI6 582 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 SLC5A4Q9NY91 659 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ZNF532Q9HCE3 1301 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 RLFQ13129 1914 aa6.17□□□□□ -1.42
PTCD3-219ENST00000494323 ARID1BQ8NFD5 2236 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-219ENST00000494323 PRUNE2Q8WUY3 3088 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 A0A1W2PQ45 241 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-219ENST00000494323 A0A1W2PQY0 241 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 EFCAB14O75071 495 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 CHGBP05060 677 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 FCER1AP12319 257 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 SDSP20132 328 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 LTBRP36941 435 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 EPHB4P54760 987 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 CHRNEQ04844 493 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 TMEM132BQ14DG7 1078 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 NTRK3Q16288 839 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 DENND5AQ6IQ26 1287 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 CEP85Q6P2H3 762 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 CERS3Q8IU89 383 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 SPPL2CQ8IUH8 684 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 LCORLQ8N3X6 602 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 OXR1Q8N573 874 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 TMEM52Q8NDY8 209 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 GSTCDQ8NEC7 633 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 SHCBP1Q8NEM2 672 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 PDZD8Q8NEN9 1154 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 MAFAQ8NHW3 353 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-219ENST00000494323 PANK1Q8TE04 598 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 DIO2Q92813 273 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 MROH8Q9H579 483 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 PDLIM7Q9NR12 457 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 GPR27Q9NS67 375 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 FBXO28Q9NVF7 368 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 NPFFR2Q9Y5X5 522 aa6.16□□□□□ -1.42
PTCD3-219ENST00000494323 FRMPD3Q5JV73 1810 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 TCRBV5S4A2TA0A5A2 114 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 FADS2P1A8MWK0 482 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 PQBP1O60828 265 aaKnown RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 C8AP07357 584 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 RARBP10826 455 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 MYCLP1P12525 358 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 EEF2P13639 858 aaKnown RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 FOSL2P15408 326 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 GDNFP39905 211 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 SMAD3P84022 425 aaKnown RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 ICA1Q05084 483 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 LAPTM5Q13571 262 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 SNX17Q15036 470 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 TTF1Q15361 905 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 TMEM179Q6ZVK1 233 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 ZSWIM9Q86XI8 627 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 JAMLQ86YT9 394 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 MB21D1Q8N884 522 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 SLC7A14Q8TBB6 771 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 PPM1EQ8WY54 764 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 TARS2Q9BW92 718 aaKnown RBP6.15□□□□□ -1.42
PTCD3-219ENST00000494323 BOLA2Q9H3K6 86 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 VCPKMTQ9H867 229 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 XPNPEP3Q9NQH7 507 aa6.15□□□□□ -1.42
PTCD3-219ENST00000494323 SFMBT1Q9UHJ3 866 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms