RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 LIMCH1Q9UPQ0 1083 aa7.21□□□□□ -1.26
SSB-212ENST00000494051 RUVBL1Q9Y265 456 aaKnown RBP7.21□□□□□ -1.26
SSB-212ENST00000494051 CCDC154A6NI56 674 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 NPIPB8E9PQR5 432 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 LEFTY2O00292 366 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 PJA2O43164 708 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 GPR32O75388 356 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 ATP5JP18859 108 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 TACR2P21452 398 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 MGAT1P26572 445 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 PCSK1P29120 753 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 RECQLP46063 649 aaPredicted RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 SLC25A3Q00325 362 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 NHLH2Q02577 135 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 TUBA3CQ13748 450 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 ATXN7L2Q5T6C5 722 aaPredicted RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 TUBA3EQ6PEY2 450 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 DRICH1Q6PGQ1 229 aaPredicted RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 RSPH3Q86UC2 560 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 SYT12Q8IV01 421 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 ZGPATQ8N5A5 531 aaKnown RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 STAG1Q8WVM7 1258 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 COA7Q96BR5 231 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 CEP89Q96ST8 783 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 TDP1Q9NUW8 608 aa7.2□□□□□ -1.26
SSB-212ENST00000494051 TYW1Q9NV66 732 aaKnown RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 REXO2Q9Y3B8 237 aaKnown RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 MYBBP1AQ9BQG0 1328 aaKnown RBP7.2□□□□□ -1.26
SSB-212ENST00000494051 GRXCR1A8MXD5 290 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 HTRA2O43464 458 aaPredicted RBP7.19□□□□□ -1.26
SSB-212ENST00000494051 AMY1AP04745 511 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 PDGFRBP09619 1106 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 DDCP20711 480 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 IL10RAQ13651 578 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 C3orf36Q3SXR2 165 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 CASKIN2Q8WXE0 1202 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 CHMP4CQ96CF2 233 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 SLC2A4RGQ9NR83 387 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 SERPINB13Q9UIV8 391 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 LUC7L2Q9Y383 392 aaKnown RBP7.19□□□□□ -1.26
SSB-212ENST00000494051 IPPQ9Y573 584 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
SSB-212ENST00000494051 TRIM24O15164 1050 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 TEX33O43247 280 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 RPS6KA4O75676 772 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 NEK2P51955 445 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 ADKP55263 362 aaKnown RBP7.18□□□□□ -1.26
SSB-212ENST00000494051 RNASE9P60153 205 aaKnown RBP7.18□□□□□ -1.26
SSB-212ENST00000494051 MIER2Q8N344 545 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 ZNF276Q8N554 614 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 MYOCQ99972 504 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 AASDHPPTQ9NRN7 309 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 TRPM5Q9NZQ8 1165 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 HS3ST3A1Q9Y663 406 aa7.18□□□□□ -1.26
SSB-212ENST00000494051 DRGXA6NNA5 263 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 ALDH1L1O75891 902 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 ZNF202O95125 648 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 FSHBP01225 129 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 EDNRBP24530 442 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 CHN2P52757 468 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 MTM1Q13496 603 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 IGFL4Q6B9Z1 124 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 OTUD7BQ6GQQ9 843 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 ZNF529Q6P280 563 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 Q8N1X5 172 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
SSB-212ENST00000494051 KAT5Q92993 513 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 TMX3Q96JJ7 454 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 DCLRE1CQ96SD1 692 aaKnown RBP7.17□□□□□ -1.26
SSB-212ENST00000494051 SLC23A1Q9UHI7 598 aa7.17□□□□□ -1.26
SSB-212ENST00000494051 AHRRA9YTQ3 701 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 FZD7O75084 574 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 ZRANB2O95218 330 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSB-212ENST00000494051 POMCP01189 267 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 CREMQ03060 361 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 TARDBPQ13148 414 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSB-212ENST00000494051 MED25Q71SY5 747 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 UBE3BQ7Z3V4 1068 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 GDF7Q7Z4P5 450 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 DRC7Q8IY82 874 aa7.16□□□□□ -1.26
SSB-212ENST00000494051 ZNF768Q9H5H4 540 aaKnown RBP7.16□□□□□ -1.26
SSB-212ENST00000494051 NARSO43776 548 aaKnown RBP7.15□□□□□ -1.26
SSB-212ENST00000494051 IL33O95760 270 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 ATP8B2P98198 1209 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 CDC42EP1Q00587 391 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 UBXN2BQ14CS0 331 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 FNDC7Q5VTL7 733 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 CMTR2Q8IYT2 770 aaKnown RBP7.15□□□□□ -1.26
SSB-212ENST00000494051 CPA6Q8N4T0 437 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 ZNF483Q8TF39 744 aaPredicted RBP7.15□□□□□ -1.26
SSB-212ENST00000494051 HOOK2Q96ED9 719 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 NRDE2Q9H7Z3 1164 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 MMRN2Q9H8L6 949 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 IP6K2Q9UHH9 426 aa7.15□□□□□ -1.26
SSB-212ENST00000494051 USP15Q9Y4E8 981 aaPredicted RBP7.15□□□□□ -1.26
SSB-212ENST00000494051 TCRBV7S2A1N4TA0A589 114 aa7.14□□□□□ -1.27
SSB-212ENST00000494051 KIAA0391O15091 583 aaKnown RBP7.14□□□□□ -1.27
SSB-212ENST00000494051 ZNF185O15231 689 aa7.14□□□□□ -1.27
SSB-212ENST00000494051 PEX11BO96011 259 aa7.14□□□□□ -1.27
SSB-212ENST00000494051 FAM189BP81408 668 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms