RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 GAD1Q99259 594 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 CDCA3Q99618 268 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 MTRQ99707 1265 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 JPH2Q9BR39 696 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 APOL6Q9BWW8 343 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 MRPL9Q9BYD2 267 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 INO80BQ9C086 356 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 POLR3FQ9H1D9 316 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 NXF3Q9H4D5 531 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 RSAD1Q9HA92 442 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PCDHA12Q9UN75 941 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 PRG3Q9Y2Y8 225 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 IPPQ9Y573 584 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 DENND4AQ7Z401 1863 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 KMT2EQ8IZD2 1858 aa8.97□□□□□ -0.97
HDAC6-234ENST00000493923 ZFHX2Q9C0A1 2572 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-234ENST00000493923 C2CD4DB7Z1M9 353 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 NRP1O14786 923 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 PPP1R12AO14974 1030 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 SNPHO15079 494 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 ZRANB2O95218 330 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 NPTXRO95502 500 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 EFEMP2O95967 443 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 CTSAP10619 480 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 AKAP5P24588 427 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 MLH1P40692 756 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 ALDH7A1P49419 539 aaKnown RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 TOB1P50616 345 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 RAB27AP51159 221 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 SCNN1GP51170 649 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 ZNF75DP51815 510 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 ZXDAP98168 799 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 CDC42EP1Q00587 391 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 KRT17Q04695 432 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 RNASELQ05823 741 aaKnown RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 CT47A1Q5JQC4 288 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 SARM1Q6SZW1 724 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 OTUD6AQ7L8S5 288 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 CCDC186Q7Z3E2 898 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 CATSPER3Q86XQ3 398 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 COLGALT2Q8IYK4 626 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 GSTCDQ8NEC7 633 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 EDAQ92838 391 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 TMEM169Q96HH4 297 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 B3GALT6Q96L58 329 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 POP1Q99575 1024 aaKnown RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 NAP1L4Q99733 375 aaKnown RBP8.96□□□□□ -0.98
HDAC6-234ENST00000493923 ANKEF1Q9NU02 776 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 KLK14Q9P0G3 267 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 LIMCH1Q9UPQ0 1083 aa8.96□□□□□ -0.98
HDAC6-234ENST00000493923 VWA8A3KMH1 1905 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 DMDP11532 3685 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 TMEM221A6NGB7 291 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 ARL5CA6NH57 179 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 PP2D1A8MPX8 630 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 M0R296 226 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 INPPL1O15357 1258 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 DKC1O60832 514 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC6-234ENST00000493923 ASGR2P07307 311 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 CNPP09543 421 aaKnown RBP8.95□□□□□ -0.98
HDAC6-234ENST00000493923 ITGA4P13612 1032 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 PLA2G4AP47712 749 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 VCPP55072 806 aaKnown RBP8.95□□□□□ -0.98
HDAC6-234ENST00000493923 DSC1Q08554 894 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 IL17AQ16552 155 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 EEF1DP3Q658K8 133 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 TRIM67Q6ZTA4 783 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 PDCD7Q8N8D1 485 aaKnown RBP8.95□□□□□ -0.98
HDAC6-234ENST00000493923 GPATCH11Q8N954 259 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 SPC24Q8NBT2 197 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 PRSS33Q8NF86 280 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 NEK11Q8NG66 645 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 TCP11Q8WWU5 503 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 UBXN4Q92575 508 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 ASIC4Q96FT7 647 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 MRFAP1L1Q96HT8 127 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 C8orf76Q96K31 380 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 KLHL5Q96PQ7 755 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 PAAF1Q9BRP4 392 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 KIFC3Q9BVG8 833 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 CSRNP2Q9H175 543 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 ACBD3Q9H3P7 528 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 PPME1Q9Y570 386 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
HDAC6-234ENST00000493923 RIF1Q5UIP0 2472 aaKnown RBP8.95□□□□□ -0.98
HDAC6-234ENST00000493923 MTCL1Q9Y4B5 1905 aaKnown RBP8.94□□□□□ -0.98
HDAC6-234ENST00000493923 A0A087WUV0 522 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-234ENST00000493923 TMCO5BA8MYB1 307 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 C2CD2LO14523 706 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 ASAP2O43150 1006 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 GAS2O43903 313 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms