RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CFAP58Q5T655 872 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 PACS2Q86VP3 889 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 DDX42Q86XP3 938 aaKnown RBP eCLIP14.8□□□□□ -0.04
VCP-207ENST00000493886 DEPTORQ8TB45 409 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 ACTRT1Q8TDG2 376 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 KCNN1Q92952 543 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 ISCUQ9H1K1 167 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 TMEM59LQ9UK28 342 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 KCNH4Q9UQ05 1017 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 GOLGA8KD6RF30 607 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 OPA1O60313 960 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 SHOX2O60902 331 aaPredicted RBP14.8□□□□□ -0.04
VCP-207ENST00000493886 CAND2O75155 1236 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 GGPS1O95749 300 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 SLC25A27O95847 323 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 FTLP02792 175 aaPredicted RBP14.8□□□□□ -0.04
VCP-207ENST00000493886 STAT5BP51692 787 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 PRPF4BQ13523 1007 aaKnown RBP14.8□□□□□ -0.04
VCP-207ENST00000493886 FAM160B1Q5W0V3 765 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 CCDC91Q7Z6B0 441 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 NOP9Q86U38 636 aaKnown RBP14.8□□□□□ -0.04
VCP-207ENST00000493886 HES6Q96HZ4 224 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 KIAA1586Q9HCI6 787 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 TXNRD2Q9NNW7 524 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 NRBP2Q9NSY0 501 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 NOCTQ9UK39 431 aaKnown RBP14.8□□□□□ -0.04
VCP-207ENST00000493886 H0YHG0 523 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 CHRNB2P17787 502 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 LIG3P49916 1009 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 CORO7P57737 925 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 SARNPP82979 210 aaKnown RBP14.79□□□□□ -0.04
VCP-207ENST00000493886 GUCY1A3Q02108 690 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 PPIL2Q13356 520 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 TARBP2Q15633 366 aaKnown RBP14.79□□□□□ -0.04
VCP-207ENST00000493886 METTL7BQ6UX53 244 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 MAATS1Q7Z4T9 603 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 SEPT1Q8WYJ6 367 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 SH3GL2Q99962 352 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 STYXL1Q9Y6J8 313 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 K7ERI5 159 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 PGK2P07205 417 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 SCP2P22307 547 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 TNFRSF8P28908 595 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 TCF7P36402 384 aaPredicted RBP14.79□□□□□ -0.04
VCP-207ENST00000493886 RFC5P40937 340 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 TNNC1P63316 161 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 LY6KQ17RY6 165 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 SLC47A2Q86VL8 602 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 OR2W6PQ8NHA6 318 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 PCDHB18PQ96TA0 734 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 FAM107BQ9H098 131 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 ACP6Q9NPH0 428 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 PGRMC1O00264 195 aaKnown RBP14.79□□□□□ -0.04
VCP-207ENST00000493886 EIF3HO15372 352 aaKnown RBP eCLIP14.79□□□□□ -0.045e-6■□□□□ 8.9
VCP-207ENST00000493886 PAK2Q13177 524 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 RHOT2Q8IXI1 618 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 MICALL1Q8N3F8 863 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 PSPC1Q8WXF1 523 aaKnown RBP14.79□□□□□ -0.04
VCP-207ENST00000493886 TATDN2Q93075 761 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 ELMO3Q96BJ8 720 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.041e-6■■■□□ 16
VCP-207ENST00000493886 RBPJLQ9UBG7 517 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 AGO2Q9UKV8 859 aaKnown RBP14.79□□□□□ -0.04
VCP-207ENST00000493886 COG5Q9UP83 839 aa14.79□□□□□ -0.04
VCP-207ENST00000493886 LRRC37A2A6NM11 1700 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 KIAA0391O15091 583 aaKnown RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 RTN2O75298 545 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 PIGRP01833 764 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 YBX3P16989 372 aaKnown RBP eCLIP14.78□□□□□ -0.041e-10■■□□□ 14.1
VCP-207ENST00000493886 HPDP32754 393 aaPredicted RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 MAGEA9P43362 315 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 NLRP11P59045 1033 aaKnown RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 PSMD6Q15008 389 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 Q3C1V9 767 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 SCFD2Q8WU76 684 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 ZNF516Q92618 1163 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 CAVIN3Q969G5 261 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 OPTNQ96CV9 577 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 FGD4Q96M96 766 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 NOC2LQ9Y3T9 749 aaKnown RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 GZMAP12544 262 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 MOGSQ13724 837 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 C15orf39Q6ZRI6 1047 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 RINLQ6ZS11 566 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 USP50Q70EL3 339 aaPredicted RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 RASGEF1CQ8N431 466 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 ZBTB45Q96K62 511 aaPredicted RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 FNBP1Q96RU3 617 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 PI4K2AQ9BTU6 479 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 HAPLN2Q9GZV7 340 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
VCP-207ENST00000493886 GDF3Q9NR23 364 aa14.78□□□□□ -0.04
VCP-207ENST00000493886 EBAG9O00559 213 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 SOCS7O14512 581 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 ARIH2O95376 493 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 MMEP08473 750 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 CYP11B1P15538 503 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 COPB2P35606 906 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms