RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TMEM130Q8N3G9 435 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 C17orf80Q9BSJ5 609 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 CWH43Q9H720 699 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 DNAJB4Q9UDY4 337 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 CTNND2Q9UQB3 1225 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 TRAF3IP3Q9Y228 551 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 LACTBL1A8MY62 500 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 CALUO43852 315 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 PTMSP20962 102 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 STX17P56962 302 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 ANKRD40Q6AI12 368 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 GOLGA5Q8TBA6 731 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 RABGGTAQ92696 567 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 MRPL9Q9BYD2 267 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 GTPBP4Q9BZE4 634 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 TTC26A0AVF1 554 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 PSMA7O14818 248 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 INPPL1O15357 1258 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 EXOC3O60645 756 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 ZC3H11AO75152 810 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 SNRPFP62306 86 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 STIM1Q13586 685 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 KYAT1Q16773 422 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 CENPPQ6IPU0 288 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 XXYLT1Q8NBI6 393 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 NELFBQ8WX92 580 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 P2RX5Q93086 422 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 FAM84AQ96KN4 292 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 NRDE2Q9H7Z3 1164 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 DMAC2Q9NW81 257 aa19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 RBAKQ9NYW8 714 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-208ENST00000493815 ADRB2P07550 413 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 NR2F2P24468 414 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 CASP4P49662 377 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 PPP2R3AQ06190 1150 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 C12orf56Q8IXR9 622 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 C18orf25Q96B23 403 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 CNTN3Q9P232 1028 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 CGNQ9P2M7 1197 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 KANSL3Q9P2N6 904 aa19.44■□□□□ 0.7
PDLIM7-208ENST00000493815 NT5C1B-RDH14C9J2C7 533 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 LDHAP00338 332 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 THP07101 528 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 NLRP12P59046 1061 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 GRIK3Q13003 919 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 SNRNP35Q16560 246 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 XKR4Q5GH76 650 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 CEP135Q66GS9 1140 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 ARNTL2Q8WYA1 636 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 CLP1Q92989 425 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 DHTKD1Q96HY7 919 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 FBXL18Q96ME1 805 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 FAM161BQ96MY7 647 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 FAM193BQ96PV7 902 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 PPP1R10Q96QC0 940 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 TTYH1Q9H313 450 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 ZNF576Q9H609 170 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 GOLGA2P5Q9HBQ8 144 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 CASTOR2A6NHX0 329 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 ZNF233A6NK53 670 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 KIAA0391O15091 583 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 NFICP08651 508 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 CCNE1P24864 410 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 CTNNB1P35222 781 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 SOX4Q06945 474 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 ADAM9Q13443 819 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 NAB2Q15742 525 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 JADE1Q6IE81 842 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 BRSK2Q8IWQ3 736 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 KIF12Q96FN5 646 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 TGS1Q96RS0 853 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 PAAF1Q9BRP4 392 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 PLEKHA5Q9HAU0 1116 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 PDE11AQ9HCR9 933 aa19.43■□□□□ 0.7
PDLIM7-208ENST00000493815 EPOPA6NHQ4 379 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 F8W810 466 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 KCNE1P15382 129 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 SLC11A1P49279 550 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 GUCY2FP51841 1108 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 BCAR1P56945 870 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 DSC1Q08554 894 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 PAK1Q13153 545 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 EPC2Q52LR7 807 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 SASS6Q6UVJ0 657 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 SLC9A9Q8IVB4 645 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 COLGALT2Q8IYK4 626 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 MLKLQ8NB16 471 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 COLGALT1Q8NBJ5 622 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 TSG101Q99816 390 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 TUBGCP4Q9UGJ1 667 aa19.42■□□□□ 0.7
PDLIM7-208ENST00000493815 RFXAPO00287 272 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 AKAP3O75969 853 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 IGFBP6P24592 240 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 BMPR1AP36894 532 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 ERVK-21P61565 698 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 SKOR2Q2VWA4 1001 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 EDRF1Q3B7T1 1238 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 LMBRD2Q68DH5 695 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms