RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 LRRC53A6NM62 1247 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 RBAK-RBAKDNI3L0D1 243 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 PJA2O43164 708 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 TGFB1I1O43294 461 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 AKAP3O75969 853 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 SUPT20HL2P0C7V6 817 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 EDNRBP24530 442 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 COL8A1P27658 744 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 NMT1P30419 496 aaKnown RBP10.9□□□□□ -0.66
PRPF3-206ENST00000493553 GTF2H1P32780 548 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 HOXD13P35453 343 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 ADH7P40394 386 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 IDH3AP50213 366 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 CASP5P51878 434 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 KIF11P52732 1056 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 POLR2FP61218 127 aaKnown RBP10.9□□□□□ -0.66
PRPF3-206ENST00000493553 MAPK7Q13164 816 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 KCTD2Q14681 263 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 ASIC2Q16515 512 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 TCERG1LQ5VWI1 586 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 ABHD15Q6UXT9 468 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 HAUS6Q7Z4H7 955 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 XXYLT1Q8NBI6 393 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 SECISBP2LQ93073 1101 aaKnown RBP10.9□□□□□ -0.66
PRPF3-206ENST00000493553 BHMTQ93088 406 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 SLC35C1Q96A29 364 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 EEF2KMTQ96G04 330 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 FIZ1Q96SL8 496 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 GSX2Q9BZM3 304 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 ATP6V0A4Q9HBG4 840 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 C11orf16Q9NQ32 467 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 NOP53Q9NZM5 478 aaKnown RBP10.9□□□□□ -0.66
PRPF3-206ENST00000493553 ZNF215Q9UL58 517 aaPredicted RBP10.9□□□□□ -0.66
PRPF3-206ENST00000493553 LRFN2Q9ULH4 789 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
PRPF3-206ENST00000493553 GLTPD2A6NH11 291 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 ASB14A6NK59 587 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 MICAL2O94851 1124 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 CCNE2O96020 404 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 UCHL3P15374 230 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 MCM3P25205 808 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 EIF4A3P38919 411 aaKnown RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 PRKCIP41743 596 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 STAT1P42224 750 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 ARHGAP25P42331 645 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 MAGEA1P43355 309 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 SLC26A2P50443 739 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 ALDH5A1P51649 535 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 ACTR2P61160 394 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 HERVK_113P62684 666 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 KLHL30Q0D2K2 578 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 CCINQ13939 588 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 TDRD12Q587J7 1177 aaKnown RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 BRDTQ58F21 947 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 FAM102BQ5T8I3 360 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 KLHDC7AQ5VTJ3 777 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 DAW1Q8N136 415 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 ACRBPQ8NEB7 543 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 SMCR8Q8TEV9 937 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 RABGGTAQ92696 567 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 GOLGA1Q92805 767 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 CLP1Q92989 425 aaKnown RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 CEP170P1Q96L14 293 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 WDR24Q96S15 920 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 ASCC2Q9H1I8 757 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 GANQ9H2C0 597 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 SUV39H2Q9H5I1 410 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 CXXC1Q9P0U4 656 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
PRPF3-206ENST00000493553 GABBR1Q9UBS5 961 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 INTUQ9ULD6 942 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 GUCA1BQ9UMX6 200 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 JRKLQ9Y4A0 524 aa10.89□□□□□ -0.67
PRPF3-206ENST00000493553 IGSF9BQ9UPX0 1349 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 BTNL10A8MVZ5 291 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ADM5C9JUS6 153 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ATP9AO75110 1047 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 CETPP11597 493 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 PRLRP16471 622 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 GARTP22102 1010 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 PON1P27169 355 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 GRNP28799 593 aaKnown RBP10.88□□□□□ -0.67
PRPF3-206ENST00000493553 FMO5P49326 533 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ARSDP51689 593 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 NCBP1Q09161 790 aaKnown RBP10.88□□□□□ -0.67
PRPF3-206ENST00000493553 BFSP1Q12934 665 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 RAPGEF1Q13905 1077 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 PRKG1Q13976 671 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 SLC18A3Q16572 532 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 COX20Q5RI15 118 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 SLFN12LQ6IEE8 588 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 CCDC70Q6NSX1 233 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 SWSAP1Q6NVH7 229 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 SRGAP1Q7Z6B7 1085 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms