RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 DNMT3BQ9UBC3 853 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 POLIQ9UNA4 740 aa15.83■□□□□ 0.12
PRPF40A-211ENST00000493468 BAHCC1Q9P281 2608 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 TICRRQ7Z2Z1 1910 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 MAN2B1O00754 1011 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 SLC37A4O43826 429 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 FOXD2O60548 495 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 KIF4AO95239 1232 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 AKAP5P24588 427 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 EPHA7Q15375 998 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 FAM171A1Q5VUB5 890 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 GALNT17Q6IS24 598 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 BLIDQ8IZY5 108 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 DDX1Q92499 740 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 ELSPBP1Q96BH3 223 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 PAAF1Q9BRP4 392 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 XPNPEP1Q9NQW7 623 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 HEBP1Q9NRV9 189 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 BMP2KQ9NSY1 1161 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 HCFC1R1Q9NWW0 138 aa15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-211ENST00000493468 A0A1B0GUA9 196 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 CCR3P51677 355 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 CAPSQ13938 189 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 CSRP2Q16527 193 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 GREB1Q4ZG55 1949 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 CHAMP1Q96JM3 812 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 ZSWIM4Q9H7M6 989 aa15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 MRPS23Q9Y3D9 190 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-211ENST00000493468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 TBX3O15119 743 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 ADAM12O43184 909 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 NPTXRO95502 500 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 GCFC2P16383 781 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 EVCP57679 992 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 NPY5RQ15761 445 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 PPP4R3AQ6IN85 833 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 PRR23CQ6ZRP0 262 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 KRT25Q7Z3Z0 450 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 CEP57Q86XR8 500 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 TRIM22Q8IYM9 498 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 HASPINQ8TF76 798 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 ING5Q8WYH8 240 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 KCNB2Q92953 911 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 PLA2G2FQ9BZM2 168 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 TRPV5Q9NQA5 729 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 SEMA4GQ9NTN9 838 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 KLK14Q9P0G3 267 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 MTRRQ9UBK8 725 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 CACNG4Q9UBN1 327 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 PARP2Q9UGN5 583 aa15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-211ENST00000493468 CASTOR2A6NHX0 329 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 B4GALT5O43286 388 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 RHOP08100 348 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 CPA1P15085 419 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 FGFR3P22607 806 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 FCARP24071 287 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 ARL2P36404 184 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 NAB2Q15742 525 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 INF2Q27J81 1249 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 SLC5A9Q2M3M2 681 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 ANGPTL2Q9UKU9 493 aa15.79■□□□□ 0.12
PRPF40A-211ENST00000493468 TMEM189-UBE2V1I3L0A0 370 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 PTGESO14684 152 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 DGAT1O75907 488 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 MICAL2O94851 1124 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 DEXIO95424 95 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 THP07101 528 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 CNR2P34972 360 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 OR1D2P34982 312 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 SHC2P98077 582 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 SPIRE1Q08AE8 756 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 LPAL2Q16609 132 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 BMP2KLQ5H9B9 411 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 TANGO2Q6ICL3 276 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 BLOC1S2Q6QNY1 142 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 MCRS1Q96EZ8 462 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 RGL1Q9NZL6 768 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 NDRG2Q9UN36 371 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 BACE2Q9Y5Z0 518 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 ATRXP46100 2492 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 SPAG17Q6Q759 2223 aa15.78■□□□□ 0.12
PRPF40A-211ENST00000493468 TRIP11Q15643 1979 aa15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 CEP295Q9C0D2 2601 aa15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 ARHGEF37A1IGU5 675 aa15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 PAPSS2O95340 614 aaPredicted RBP15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 LYPLA2O95372 231 aa15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 CEBPBP17676 345 aa15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 GLRA2P23416 452 aa15.77■□□□□ 0.12
PRPF40A-211ENST00000493468 PMLP29590 882 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms