RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KDM5CP41229 1560 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 ZMYM3Q14202 1370 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 MYO3AQ8NEV4 1616 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 TBKBP1A7MCY6 615 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 KIAA0355O15063 1070 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 KDM1AO60341 852 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 FKBP9O95302 570 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 GASTP01350 101 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 HLA-DOAP06340 250 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 SPATA31D3P0C874 917 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 RBP3P10745 1247 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 ZSCAN20P17040 1043 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-218ENST00000493430 ADCYAP1R1P41586 468 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 AVPR1BP47901 424 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 TRIM25Q14258 630 aaKnown RBP4.54□□□□□ -1.68
PTCD3-218ENST00000493430 SEPT7Q16181 437 aaKnown RBP4.54□□□□□ -1.68
PTCD3-218ENST00000493430 DDB1Q16531 1140 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 BEAN1Q3B7T3 259 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 BROXQ5VW32 411 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 CCDC62Q6P9F0 684 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 SPATA31D4Q6ZUB0 917 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 FKBP9P1Q75LS8 142 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 PDZD4Q76G19 769 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-218ENST00000493430 PRIMA1Q86XR5 153 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 SYT12Q8IV01 421 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 SLC41A1Q8IVJ1 513 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 CMTR2Q8IYT2 770 aaKnown RBP4.54□□□□□ -1.68
PTCD3-218ENST00000493430 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 PIF1Q9H611 641 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 DKK2Q9UBU2 259 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 NOC2LQ9Y3T9 749 aaKnown RBP4.54□□□□□ -1.68
PTCD3-218ENST00000493430 TNFRSF18Q9Y5U5 241 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 CLIP1P30622 1438 aa4.54□□□□□ -1.68
PTCD3-218ENST00000493430 STRCP1A6NGW2 1772 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 ITGA10O75578 1167 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 MRPS21P82921 87 aaKnown RBP4.53□□□□□ -1.68
PTCD3-218ENST00000493430 GUCY1B3Q02153 619 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 CSRP2Q16527 193 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 BMT2Q1RMZ1 405 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 ANKS6Q68DC2 871 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 BTNL9Q6UXG8 535 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 ABHD15Q6UXT9 468 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 RASSF3Q86WH2 238 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 TFAP2CQ92754 450 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 CAVIN3Q969G5 261 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 ZNF764Q96H86 408 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-218ENST00000493430 PAWRQ96IZ0 340 aaKnown RBP4.53□□□□□ -1.68
PTCD3-218ENST00000493430 COQ10AQ96MF6 247 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 SYNPO2LQ9H987 977 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 EMC7Q9NPA0 242 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 GPRC5DQ9NZD1 345 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 PLAAQ9Y263 795 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 CDY2AQ9Y6F7 541 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 PTPRMP28827 1452 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 NEO1Q92859 1461 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 FYCO1Q9BQS8 1478 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 CEP162Q5TB80 1403 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 POGZQ7Z3K3 1410 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 AKNAQ7Z591 1439 aa4.53□□□□□ -1.68
PTCD3-218ENST00000493430 EHBP1L1Q8N3D4 1523 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 MROH2AA6NES4 1674 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 XIRP1Q702N8 1843 aaKnown RBP4.52□□□□□ -1.69
PTCD3-218ENST00000493430 LOC105371045A0A1W2PR82 267 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 ZNF185O15231 689 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 CDC45O75419 566 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 HKR1P10072 659 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 CTSSP25774 331 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 LGALS4P56470 323 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 PDCD4Q53EL6 469 aaKnown RBP4.52□□□□□ -1.69
PTCD3-218ENST00000493430 PITRM1Q5JRX3 1037 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 CPEB3Q8NE35 698 aaKnown RBP4.52□□□□□ -1.69
PTCD3-218ENST00000493430 ZFP28Q8NHY6 868 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 MDM1Q8TC05 714 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 SLC5A5Q92911 643 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 MFSD3Q96ES6 412 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 FEZ1Q99689 392 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 TEX101Q9BY14 249 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 PRDM12Q9H4Q4 367 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 SYBUQ9NX95 663 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 TROQ12816 1431 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-218ENST00000493430 TRAPPC8Q9Y2L5 1435 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 PCSK5Q92824 1860 aa4.52□□□□□ -1.69
PTCD3-218ENST00000493430 ATP7AQ04656 1500 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 RPTORQ8N122 1335 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 DENND4BO75064 1496 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-218ENST00000493430 LMTK3Q96Q04 1460 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 PIPSLA2A3N6 862 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 MASP2O00187 686 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 TMEM127O75204 238 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 LPLP06858 475 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 DDX6P26196 483 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTCD3-218ENST00000493430 CRHR1P34998 444 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 BLOC1S1P78537 153 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 MXRA7P84157 204 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 ERCC6LQ2NKX8 1250 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 ATP13A4Q4VNC1 1196 aa4.51□□□□□ -1.69
PTCD3-218ENST00000493430 DALRD3Q5D0E6 543 aaKnown RBP4.51□□□□□ -1.69
PTCD3-218ENST00000493430 FAM102AQ5T9C2 384 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-218ENST00000493430 ABHD17BQ5VST6 288 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms