RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 CEP170P1Q96L14 293 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 TCEANC2Q96MN5 208 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 MBOAT7Q96N66 472 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 TRMT61BQ9BVS5 477 aaKnown RBP6.4□□□□□ -1.38
A1CF-210ENST00000493415 NIFKQ9BYG3 293 aaKnown RBP6.4□□□□□ -1.38
A1CF-210ENST00000493415 PLA2G2FQ9BZM2 168 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 SLKQ9H2G2 1235 aaPredicted RBP6.4□□□□□ -1.38
A1CF-210ENST00000493415 NXF3Q9H4D5 531 aaKnown RBP6.4□□□□□ -1.38
A1CF-210ENST00000493415 IFT122Q9HBG6 1241 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 CHST7Q9NS84 486 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 MIOSQ9NXC5 875 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 DNMT3BQ9UBC3 853 aaKnown RBP6.4□□□□□ -1.38
A1CF-210ENST00000493415 KCNH3Q9ULD8 1083 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 GIT1Q9Y2X7 761 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 PIAS3Q9Y6X2 628 aa6.4□□□□□ -1.38
A1CF-210ENST00000493415 ATRXP46100 2492 aa6.4□□□□□ -1.39
A1CF-210ENST00000493415 TRIP11Q15643 1979 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 ATG2BQ96BY7 2078 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 IGKV6-21A0A0C4DH24 114 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 KLF18A0A0U1RQI7 1052 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 SOBPA7XYQ1 873 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 SLC27A2O14975 620 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 SGSM2O43147 1006 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 HRO43593 1189 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 TSPAN1O60635 241 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 KIF4AO95239 1232 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 KCNK5O95279 499 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 C1RP00736 705 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 TDGF1P13385 188 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 SPINK2P20155 84 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CCNE1P24864 410 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 AXLP30530 894 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 ELF1P32519 619 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CNR2P34972 360 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 RBM25P49756 843 aaKnown RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 KPNA1P52294 538 aaPredicted RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 LIMK1P53667 647 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 NPEPPSP55786 919 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 PSMC5P62195 406 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 LAMTOR4Q0VGL1 99 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 PFKFB3Q16875 520 aaPredicted RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 RNF43Q68DV7 783 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 TANGO2Q6ICL3 276 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 PDXDC1Q6P996 788 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CDR2LQ86X02 465 aaPredicted RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 YAF2Q8IY57 180 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CCDC148Q8NFR7 591 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 RDM1Q8NG50 284 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 BICD2Q8TD16 824 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 TCP11Q8WWU5 503 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 IRF7Q92985 503 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 ELSPBP1Q96BH3 223 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CCDC51Q96ER9 411 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CCDC43Q96MW1 224 aaKnown RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 RIT2Q99578 217 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 MTRQ99707 1265 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CLSTN3Q9BQT9 956 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 CORO1BQ9BR76 489 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 LARP6Q9BRS8 491 aaKnown RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 CSRNP2Q9H175 543 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 SMOC1Q9H4F8 434 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 SLITRK6Q9H5Y7 841 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 MINDY3Q9H8M7 445 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 RBM12Q9NTZ6 932 aaKnown RBP6.39□□□□□ -1.39
A1CF-210ENST00000493415 GDE1Q9NZC3 331 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 LHX6Q9UPM6 363 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
A1CF-210ENST00000493415 EML5Q05BV3 1969 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 F5P12259 2224 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ESYT2A0FGR8 921 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 SLC38A8A6NNN8 435 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 PRRG1O14668 218 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ZNF263O14978 683 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ADAMTS3O15072 1205 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ADAM12O43184 909 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 MARCH6O60337 910 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 DKC1O60832 514 aaKnown RBP eCLIP6.38□□□□□ -1.39
A1CF-210ENST00000493415 PAPLNO95428 1278 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 HOXA11P31270 313 aaPredicted RBP6.38□□□□□ -1.39
A1CF-210ENST00000493415 CIITAP33076 1130 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 OR1D2P34982 312 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 RFC5P40937 340 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ARPP19P56211 112 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ELAVL2Q12926 359 aaKnown RBP6.38□□□□□ -1.39
A1CF-210ENST00000493415 TUSC3Q13454 348 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 FZD5Q13467 585 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 TFDP1Q14186 410 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 EMC2Q15006 297 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 SLC5A9Q2M3M2 681 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 CREB3L3Q68CJ9 461 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 DIEXFQ68CQ4 756 aaKnown RBP6.38□□□□□ -1.39
A1CF-210ENST00000493415 KIAA1211LQ6NV74 962 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 Q6ZS52 159 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 ANO5Q75V66 913 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 PDZD4Q76G19 769 aaPredicted RBP6.38□□□□□ -1.39
A1CF-210ENST00000493415 SGMS1Q86VZ5 419 aa6.38□□□□□ -1.39
A1CF-210ENST00000493415 EXOC8Q8IYI6 725 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms