RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ZBTB41Q5SVQ8 909 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 ALKAL1Q6UXT8 129 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 CBWD2Q8IUF1 395 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 CRIPAKQ8N1N5 446 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 CEP120Q8N960 986 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 SNX27Q96L92 541 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
LSM2-214ENST00000493387 MED15Q96RN5 788 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 FNBP1Q96RU3 617 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 MRPL9Q9BYD2 267 aaKnown RBP12.55□□□□□ -0.4
LSM2-214ENST00000493387 TMEM117Q9H0C3 514 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 ARMCX3Q9UH62 379 aaPredicted RBP12.55□□□□□ -0.4
LSM2-214ENST00000493387 DERAQ9Y315 318 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 BRCA2P51587 3418 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 MICAL3Q7RTP6 2002 aa12.55□□□□□ -0.4
LSM2-214ENST00000493387 CARNS1A5YM72 827 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 GOLGA6L19H0YKK7 550 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 STX10O60499 249 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 OFD1O75665 1012 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 CXCL8P10145 99 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 KCNE1P15382 129 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
LSM2-214ENST00000493387 IBSPP21815 317 aaPredicted RBP12.54□□□□□ -0.4
LSM2-214ENST00000493387 TNFSF9P41273 254 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 CASP4P49662 377 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 AP3M2P53677 418 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
LSM2-214ENST00000493387 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
LSM2-214ENST00000493387 DEFB103AP81534 67 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 SPAG1Q07617 926 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 IQCB1Q15051 598 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 SEZ6Q53EL9 994 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 TMEM192Q8IY95 271 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 AOPEPQ8N6M6 819 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
LSM2-214ENST00000493387 LPPQ93052 612 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 GAD1Q99259 594 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 CBX8Q9HC52 389 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
LSM2-214ENST00000493387 ARL5CA6NH57 179 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 LACTBL1A8MY62 500 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 DGKIO75912 1065 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 UPP2O95045 317 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 GJB5O95377 273 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 THP07101 528 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 TPM2P07951 284 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 EEF1GP26641 437 aaKnown RBP12.53□□□□□ -0.4
LSM2-214ENST00000493387 GTF2H1P32780 548 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 MLH1P40692 756 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 VAMP7P51809 220 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 BFSP1Q12934 665 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 GRIK3Q13003 919 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 NCAPHQ15003 741 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 SHHQ15465 462 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 CLLU1OSQ5K130 101 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 HERC6Q8IVU3 1022 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 DHX40Q8IX18 779 aaKnown RBP12.53□□□□□ -0.4
LSM2-214ENST00000493387 CMTR2Q8IYT2 770 aaKnown RBP12.53□□□□□ -0.4
LSM2-214ENST00000493387 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 PARD3BQ8TEW8 1205 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 EEF2KMTQ96G04 330 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 BORCS6Q96GS4 357 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 ZBED2Q9BTP6 218 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 KLK14Q9P0G3 267 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
LSM2-214ENST00000493387 INSL6Q9Y581 213 aa12.53□□□□□ -0.4
LSM2-214ENST00000493387 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 TBKBP1A7MCY6 615 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 FGFR1P11362 822 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 TNNI1P19237 187 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CYP3A5P20815 502 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CDK11BP21127 795 aaKnown RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 CLDN10P78369 228 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 RNASELQ05823 741 aaKnown RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 DUOXA2Q1HG44 320 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CDKAL1Q5VV42 579 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CREBRFQ8IUR6 639 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 BEST2Q8NFU1 509 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 HELQQ8TDG4 1101 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CCDC127Q96BQ5 260 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 ANKRD36BP1Q96IX9 119 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CNOT6LQ96LI5 555 aaKnown RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 CASD1Q96PB1 797 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 FAM193BQ96PV7 902 aaPredicted RBP12.52□□□□□ -0.41
LSM2-214ENST00000493387 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 RAD9AQ99638 391 aa12.52□□□□□ -0.41
LSM2-214ENST00000493387 CGRRF1Q99675 332 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms