RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ATF7P17544 494 aaPredicted RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 YARSP54577 528 aaKnown RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 MYL5Q02045 173 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 SNRNP35Q16560 246 aaKnown RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 SPATA1Q5VX52 437 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 CRELD2Q6UXH1 353 aaPredicted RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 MICAL3Q7RTP6 2002 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 SLC9A9Q8IVB4 645 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 PGBD4Q96DM1 585 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 TRAIPQ9BWF2 469 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 RPF1Q9H9Y2 349 aaKnown RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 SLC28A3Q9HAS3 691 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 CBX8Q9HC52 389 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 RBAKQ9NYW8 714 aaPredicted RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 THEGQ9P2T0 379 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 CPSF3Q9UKF6 684 aaKnown RBP18.7■□□□□ 0.58
LIME1-208ENST00000493265 INPP5FQ9Y2H2 1132 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 NFE2L3Q9Y4A8 694 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 MUC3AQ02505 3323 aa18.7■□□□□ 0.58
LIME1-208ENST00000493265 ZNF233A6NK53 670 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 BECN2A8MW95 431 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 KIAA0391O15091 583 aaKnown RBP18.69■□□□□ 0.58
LIME1-208ENST00000493265 ZNF623O75123 536 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 AKAP3O75969 853 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 ADRB2P07550 413 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 GATMP50440 423 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 RABGGTBP53611 331 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 FAM189BP81408 668 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 ENOX2Q16206 610 aaKnown RBP18.69■□□□□ 0.58
LIME1-208ENST00000493265 NFIL3Q16649 462 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 KYAT1Q16773 422 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 AGMOQ6ZNB7 445 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 LRRC55Q6ZSA7 311 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 MRPL10Q7Z7H8 261 aaKnown RBP18.69■□□□□ 0.58
LIME1-208ENST00000493265 FAM186BQ8IYM0 893 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 RNF214Q8ND24 703 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 ENOX1Q8TC92 643 aaKnown RBP18.69■□□□□ 0.58
LIME1-208ENST00000493265 HELQQ8TDG4 1101 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 KIAA1586Q9HCI6 787 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 TMEM161AQ9NX61 479 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 SLC4A7Q9Y6M7 1214 aa18.69■□□□□ 0.58
LIME1-208ENST00000493265 FGFR1OPO95684 399 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 EPB41P11171 864 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 PSMC2P35998 433 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 MLH1P40692 756 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 SPAG1Q07617 926 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 MYBPC2Q14324 1141 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 ZNF598Q86UK7 904 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 LUZP1Q86V48 1076 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 NPAS4Q8IUM7 802 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 DHX40Q8IX18 779 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 CCDC127Q96BQ5 260 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 ZFP42Q96MM3 310 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 CEP63Q96MT8 703 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 GAD1Q99259 594 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 CXCL16Q9H2A7 254 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 RSAD1Q9HA92 442 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 SAMSN1Q9NSI8 373 aaKnown RBP18.68■□□□□ 0.58
LIME1-208ENST00000493265 FANCLQ9NW38 375 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 CHD7Q9P2D1 2997 aa18.68■□□□□ 0.58
LIME1-208ENST00000493265 LACTBL1A8MY62 500 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 EOMESO95936 686 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 MYOGP15173 224 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 PPP2R3AQ06190 1150 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 SLC10A6Q3KNW5 377 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 PPP2R2DQ66LE6 453 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 FAM43BQ6ZT52 329 aaPredicted RBP18.67■□□□□ 0.58
LIME1-208ENST00000493265 ZC3H3Q8IXZ2 948 aaKnown RBP18.67■□□□□ 0.58
LIME1-208ENST00000493265 MICALL1Q8N3F8 863 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 ASB2Q96Q27 587 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 RPS6KC1Q96S38 1066 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 BPIFA3Q9BQP9 254 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 ELAC1Q9H777 363 aaKnown RBP18.67■□□□□ 0.58
LIME1-208ENST00000493265 PDE11AQ9HCR9 933 aa18.67■□□□□ 0.58
LIME1-208ENST00000493265 TOPORSQ9NS56 1045 aaPredicted RBP18.67■□□□□ 0.58
LIME1-208ENST00000493265 SMTNL1A8MU46 457 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 SLC16A3O15427 465 aaKnown RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 MEFVO15553 781 aaPredicted RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 DLATP10515 647 aaKnown RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 KRT13P13646 458 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 AFF1P51825 1210 aaKnown RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 WNT7BP56706 349 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 CYP24A1Q07973 514 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 HSP90AA2PQ14568 343 aaPredicted RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 PAN2Q504Q3 1202 aaKnown RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 GLRA4Q5JXX5 417 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 LMBRD2Q68DH5 695 aaPredicted RBP18.66■□□□□ 0.58
LIME1-208ENST00000493265 FOXR2Q6PJQ5 311 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 GLB1LQ6UWU2 654 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 FILIP1Q7Z7B0 1213 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 BRSK2Q8IWQ3 736 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 ABI1Q8IZP0 508 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 FAM200AQ8TCP9 573 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 ADAMTS19Q8TE59 1207 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 SNX27Q96L92 541 aa18.66■□□□□ 0.58
LIME1-208ENST00000493265 CNOT6LQ96LI5 555 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms