RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 TRPC3Q13507 836 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 BFSP2Q13515 415 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
FDPS-218ENST00000492887 ENOX2Q16206 610 aaKnown RBP8.7□□□□□ -1.02
FDPS-218ENST00000492887 AMHR2Q16671 573 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 ARHGAP44Q17R89 818 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 CBWD6Q4V339 395 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 CBWD3Q5JTY5 395 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 CBWD5Q5RIA9 395 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 RRAGAQ7L523 313 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 LRRC8AQ8IWT6 810 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 PLEKHO2Q8TD55 490 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 PARD3BQ8TEW8 1205 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 U2AF1L4Q8WU68 220 aaKnown RBP8.7□□□□□ -1.02
FDPS-218ENST00000492887 CACTINQ8WUQ7 758 aaKnown RBP8.7□□□□□ -1.02
FDPS-218ENST00000492887 TMEM40Q8WWA1 233 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 WNT8BQ93098 351 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 CCDC51Q96ER9 411 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 ZNF333Q96JL9 665 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 NT5C1BQ96P26 610 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 ACAP3Q96P50 834 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
FDPS-218ENST00000492887 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
FDPS-218ENST00000492887 IMPG2Q9BZV3 1241 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 TMEM117Q9H0C3 514 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 TRPV6Q9H1D0 765 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 C1orf112Q9NSG2 853 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 SNTG2Q9NY99 539 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 CEP72Q9P209 647 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 OGDHLQ9ULD0 1010 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 SIK3Q9Y2K2 1263 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 STYXL1Q9Y6J8 313 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 GRIN2DO15399 1336 aa8.7□□□□□ -1.02
FDPS-218ENST00000492887 KIAA0100Q14667 2235 aaKnown RBP8.7□□□□□ -1.02
FDPS-218ENST00000492887 TTC26A0AVF1 554 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 P4HA2O15460 535 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 CAND2O75155 1236 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 SGPL1O95470 568 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 CLTAP09496 248 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 PROZP22891 400 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 CD52P31358 61 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 GTF2H1P32780 548 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 USP8P40818 1118 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 GRM5P41594 1212 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 FXR1P51114 621 aaKnown RBP eCLIP8.69□□□□□ -1.022e-8■■□□□ 13.1
FDPS-218ENST00000492887 ZBED6P86452 979 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 MGAT3Q09327 533 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 TBX2Q13207 712 aaPredicted RBP8.69□□□□□ -1.02
FDPS-218ENST00000492887 ASIC2Q16515 512 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 HS1BP3Q53T59 392 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 ZNF618Q5T7W0 954 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 SFMBT2Q5VUG0 894 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 TRIM65Q6PJ69 517 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 CRELD2Q6UXH1 353 aaPredicted RBP8.69□□□□□ -1.02
FDPS-218ENST00000492887 WDR49Q8IV35 697 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 PPM1KQ8N3J5 372 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 RNF169Q8NCN4 708 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 CAGE1Q8TC20 777 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 DHX38Q92620 1227 aaKnown RBP8.69□□□□□ -1.02
FDPS-218ENST00000492887 BORCS6Q96GS4 357 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 RPS6KC1Q96S38 1066 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 EIF2AQ9BY44 585 aaKnown RBP8.69□□□□□ -1.02
FDPS-218ENST00000492887 SEZ6LQ9BYH1 1024 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 MTMR12Q9C0I1 747 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 ABHD10Q9NUJ1 306 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 CPSF3Q9UKF6 684 aaKnown RBP8.69□□□□□ -1.02
FDPS-218ENST00000492887 CAPN11Q9UMQ6 739 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 ST3GAL5Q9UNP4 418 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 ATP11BQ9Y2G3 1177 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 ZKSCAN5Q9Y2L8 839 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
FDPS-218ENST00000492887 A0A1B0GUA9 196 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 A0A1W2PQJ5 194 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 LRRC53A6NM62 1247 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 DCDC2CA8MYV0 355 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 ABLIM1O14639 778 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 EPHB6O15197 1021 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 XPOTO43592 962 aaKnown RBP8.68□□□□□ -1.02
FDPS-218ENST00000492887 LRRN2O75325 713 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 OFD1O75665 1012 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 IPO7O95373 1038 aaKnown RBP8.68□□□□□ -1.02
FDPS-218ENST00000492887 HLA-DRAP01903 254 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 CHRNA1P02708 482 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 CKBP12277 381 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 SKILP12757 684 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 PON1P27169 355 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 AP3M2P53677 418 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 APBA1Q02410 837 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 ARID5AQ03989 594 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 ENPEPQ07075 957 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 TMEM132DQ14C87 1099 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 DUOXA2Q1HG44 320 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 FIGNQ5HY92 759 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 FBXO47Q5MNV8 452 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 JADE1Q6IE81 842 aa8.68□□□□□ -1.02
FDPS-218ENST00000492887 PDXDC1Q6P996 788 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms