RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 LNX1Q8TBB1 728 aaPredicted RBP16.02■□□□□ 0.16
SSR4-212ENST00000491833 ZNF274Q96GC6 653 aaPredicted RBP16.02■□□□□ 0.16
SSR4-212ENST00000491833 PRIMPOLQ96LW4 560 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
SSR4-212ENST00000491833 EPC1Q9H2F5 836 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 ZSCAN32Q9NX65 697 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 MTF2Q9Y483 593 aaPredicted RBP16.02■□□□□ 0.16
SSR4-212ENST00000491833 NCOR2Q9Y618 2525 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 DOCK6Q96HP0 2047 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 NCAM2O15394 837 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 CDKL5O76039 1030 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 SLITRK3O94933 977 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 LYPLA2O95372 231 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 CD72P21854 359 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 LMNB2Q03252 620 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 PABPC1LQ4VXU2 614 aaKnown RBP16.01■□□□□ 0.15
SSR4-212ENST00000491833 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 NPAS3Q8IXF0 933 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 ZBTB44Q8NCP5 570 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 EIF2AK1Q9BQI3 630 aaKnown RBP16.01■□□□□ 0.15
SSR4-212ENST00000491833 ANKEF1Q9NU02 776 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
SSR4-212ENST00000491833 CDV3Q9UKY7 258 aaKnown RBP16.01■□□□□ 0.15
SSR4-212ENST00000491833 KCNH3Q9ULD8 1083 aa16.01■□□□□ 0.15
SSR4-212ENST00000491833 VWA8A3KMH1 1905 aa16■□□□□ 0.15
SSR4-212ENST00000491833 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
SSR4-212ENST00000491833 PRR5-ARHGAP8B1AHC4 643 aa16■□□□□ 0.15
SSR4-212ENST00000491833 USO1O60763 962 aaKnown RBP16■□□□□ 0.15
SSR4-212ENST00000491833 LILRB5O75023 590 aa16■□□□□ 0.15
SSR4-212ENST00000491833 REC8O95072 547 aa16■□□□□ 0.15
SSR4-212ENST00000491833 THP07101 528 aa16■□□□□ 0.15
SSR4-212ENST00000491833 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
SSR4-212ENST00000491833 RPS9P46781 194 aaKnown RBP16■□□□□ 0.15
SSR4-212ENST00000491833 RARRES1P49788 294 aa16■□□□□ 0.15
SSR4-212ENST00000491833 ARHGAP8P85298 464 aa16■□□□□ 0.15
SSR4-212ENST00000491833 UVSSAQ2YD98 709 aa16■□□□□ 0.15
SSR4-212ENST00000491833 AXDND1Q5T1B0 1012 aaPredicted RBP16■□□□□ 0.15
SSR4-212ENST00000491833 PDZRN4Q6ZMN7 1036 aaPredicted RBP16■□□□□ 0.15
SSR4-212ENST00000491833 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
SSR4-212ENST00000491833 HCFC1R1Q9NWW0 138 aa16■□□□□ 0.15
SSR4-212ENST00000491833 MRPS17Q9Y2R5 130 aaKnown RBP16■□□□□ 0.15
SSR4-212ENST00000491833 CYP46A1Q9Y6A2 500 aa16■□□□□ 0.15
SSR4-212ENST00000491833 STK36Q9NRP7 1315 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 PTGESO14684 152 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 N4BP3O15049 544 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 ADAM12O43184 909 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 ECI2O75521 394 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 ATXN1P54253 815 aaKnown RBP15.99■□□□□ 0.15
SSR4-212ENST00000491833 TMEM132AQ24JP5 1023 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 ZBTB8OSQ8IWT0 167 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 ING5Q8WYH8 240 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 CLDN23Q96B33 292 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 NELL2Q99435 816 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 PRMT8Q9NR22 394 aaPredicted RBP15.99■□□□□ 0.15
SSR4-212ENST00000491833 DNMT3BQ9UBC3 853 aaKnown RBP15.99■□□□□ 0.15
SSR4-212ENST00000491833 GMEB2Q9UKD1 530 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 USP18Q9UMW8 372 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 MRPS23Q9Y3D9 190 aaKnown RBP15.99■□□□□ 0.15
SSR4-212ENST00000491833 GPR179Q6PRD1 2367 aa15.99■□□□□ 0.15
SSR4-212ENST00000491833 FRYLO94915 3013 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 TBC1D4O60343 1298 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
SSR4-212ENST00000491833 RECQL4O94761 1208 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 OR1D2P34982 312 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 RAB33AQ14088 237 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
SSR4-212ENST00000491833 ZNF852Q6ZMS4 543 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 RTL10Q7L3V2 364 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 OXER1Q8TDS5 423 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 NELL1Q92832 810 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 HSD17B14Q9BPX1 270 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 ADPGKQ9BRR6 497 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 LARP6Q9BRS8 491 aaKnown RBP15.98■□□□□ 0.15
SSR4-212ENST00000491833 RTKNQ9BST9 563 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 FAM126AQ9BYI3 521 aaPredicted RBP15.98■□□□□ 0.15
SSR4-212ENST00000491833 PDZD7Q9H5P4 517 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 SNTG2Q9NY99 539 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 MTRRQ9UBK8 725 aa15.98■□□□□ 0.15
SSR4-212ENST00000491833 KRT37O76014 449 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 NAB2Q15742 525 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 CALCRLQ16602 461 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 FAM187BQ17R55 369 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 EARS2Q5JPH6 523 aaKnown RBP15.97■□□□□ 0.15
SSR4-212ENST00000491833 TSSK4Q6SA08 328 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 PIGOQ8TEQ8 1089 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 DNASE1L2Q92874 299 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 C2orf40Q9H1Z8 148 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 GPRC5CQ9NQ84 441 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 HEBP1Q9NRV9 189 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 GDE1Q9NZC3 331 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 PCDHA12Q9UN75 941 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 CDY1Q9Y6F8 540 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 CACNA1BQ00975 2339 aa15.97■□□□□ 0.15
SSR4-212ENST00000491833 NOTCH4Q99466 2003 aa15.96■□□□□ 0.15
SSR4-212ENST00000491833 WDR87Q6ZQQ6 2873 aa15.96■□□□□ 0.15
SSR4-212ENST00000491833 FAM205CA6NFA0 338 aa15.96■□□□□ 0.15
SSR4-212ENST00000491833 TMEM189-UBE2V1I3L0A0 370 aa15.96■□□□□ 0.15
SSR4-212ENST00000491833 RHOP08100 348 aa15.96■□□□□ 0.15
SSR4-212ENST00000491833 FGFR3P22607 806 aa15.96■□□□□ 0.15
SSR4-212ENST00000491833 ADCY1Q08828 1119 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms