RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 THP07101 528 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 SPATA31D3P0C874 917 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 MYBP10242 640 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 ZXDAP98168 799 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 SOX4Q06945 474 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 DMP1Q13316 513 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 PTPAQ15257 358 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 TMEM132AQ24JP5 1023 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 XKR4Q5GH76 650 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 GLRA4Q5JXX5 417 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 LILRA6Q6PI73 481 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 SPATA31D4Q6ZUB0 917 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 TMEM161BQ8NDZ6 487 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 SPIRE2Q8WWL2 714 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 ZBTB45Q96K62 511 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 ADPGKQ9BRR6 497 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 SFXN1Q9H9B4 322 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 C17orf75Q9HAS0 396 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 MYO10Q9HD67 2058 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 VWA8A3KMH1 1905 aa13.93□□□□□ -0.18
SEC61A1-206ENST00000491668 SPTLC2O15270 562 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 NR1I2O75469 434 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 PAPLNO95428 1278 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 YEATS4O95619 227 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 MAPTP10636 758 aaKnown RBP13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 PLS3P13797 630 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 GRM5P41594 1212 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 MTHFRP42898 656 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 USP41Q3LFD5 358 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 ATAT1Q5SQI0 421 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 TRIM67Q6ZTA4 783 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 ZBTB33Q86T24 672 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 GPR65Q8IYL9 337 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 KCTD17Q8N5Z5 321 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 RIN2Q8WYP3 895 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 ZNF707Q96C28 371 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 SPATA32Q96LK8 384 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 AK8Q96MA6 479 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 RIPOR3Q96MK2 946 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 TIPINQ9BVW5 301 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 MRPL4Q9BYD3 311 aaKnown RBP13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 HAPLN2Q9GZV7 340 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 SCAND2PQ9GZW5 306 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 SMOC2Q9H3U7 446 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 MAN1C1Q9NR34 630 aa13.92□□□□□ -0.18
SEC61A1-206ENST00000491668 MYH11P35749 1972 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 SMIM28A0A1B0GU29 152 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 ADAM12O43184 909 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 TGM5O43548 720 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 TADA2AO75478 443 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 RFPL2O75678 378 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 ADH1AP07327 375 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 PLCG1P19174 1290 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 ME1P48163 572 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 CLCNKBP51801 687 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 OSTNP61366 133 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 KARSQ15046 597 aaKnown RBP13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 ZNF568Q3ZCX4 644 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 FAM171A1Q5VUB5 890 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 LINC00301Q8NCQ3 95 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 C3orf58Q8NDZ4 430 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 CMASQ8NFW8 434 aaPredicted RBP13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 LNX1Q8TBB1 728 aaPredicted RBP13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 ASIC4Q96FT7 647 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 CLSTN3Q9BQT9 956 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 REEP2Q9BRK0 252 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 KCND2Q9NZV8 630 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 SSX2IPQ9Y2D8 614 aa13.91□□□□□ -0.18
SEC61A1-206ENST00000491668 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.184e-7■■■■■ 86.2
SEC61A1-206ENST00000491668 PIEZO1Q92508 2521 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 TMEM221A6NGB7 291 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 M0R296 226 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 SLC26A4O43511 780 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 GLUD1P00367 558 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 MCF2P10911 925 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 LONP1P36776 959 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 UBA7P41226 1012 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 ZNF131P52739 623 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 MCM6Q14566 821 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 UPP1Q16831 310 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 SEZ6Q53EL9 994 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 MPZL3Q6UWV2 235 aa13.9□□□□□ -0.18
SEC61A1-206ENST00000491668 C15orf39Q6ZRI6 1047 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms