RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 RFFLQ8WZ73 363 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 AMNQ9BXJ7 453 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 SEMA4AQ9H3S1 761 aa10.85□□□□□ -0.67
BRD9-209ENST00000490814 UBE2TQ9NPD8 197 aaPredicted RBP10.85□□□□□ -0.67
BRD9-209ENST00000490814 ASTN1O14525 1302 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 EML1O00423 815 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 RASGRF2O14827 1237 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 PENKP01210 267 aaPredicted RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 LBRQ14739 615 aaKnown RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 SAMD7Q7Z3H4 446 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 IQCF2Q8IXL9 164 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 KIFAP3Q92845 792 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 TLCD1Q96CP7 247 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 DYDC2Q96IM9 177 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 BRD8Q9H0E9 1235 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 MTRF1LQ9UGC7 380 aaKnown RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 SLC12A4Q9UP95 1085 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 PCDHAC2Q9Y5I4 1007 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 ACSL3O95573 720 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 SPATA31C1P0DKV0 1188 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 ZFXP17010 805 aaPredicted RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 RPA1P27694 616 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 MARCKSL1P49006 195 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 TRIP13Q15645 432 aaPredicted RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 ZFYVE27Q5T4F4 411 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 PIGWQ7Z7B1 504 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 JAMLQ86YT9 394 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 SLC20A1Q8WUM9 679 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 SPIRE2Q8WWL2 714 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 KCNN1Q92952 543 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 ELMO3Q96BJ8 720 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 NAP1L3Q99457 506 aaPredicted RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 ERP44Q9BS26 406 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 KCNMB3Q9NPA1 279 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 DMAP1Q9NPF5 467 aaPredicted RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 TRAF3IP3Q9Y228 551 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 USP15Q9Y4E8 981 aaPredicted RBP10.84□□□□□ -0.67
BRD9-209ENST00000490814 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
BRD9-209ENST00000490814 H0Y3Z8 333 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 MSH4O15457 936 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 FTLP02792 175 aaPredicted RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 MSH2P43246 934 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 FMO5P49326 533 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 MARSP56192 900 aaKnown RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 BPIFB4P59827 614 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 CBWD6Q4V339 395 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 CBWD3Q5JTY5 395 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 CBWD5Q5RIA9 395 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 C6orf118Q5T5N4 469 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 RNF220Q5VTB9 566 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 ANO7Q6IWH7 933 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 TMEM154Q6P9G4 183 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 EIF1ADQ8N9N8 165 aaKnown RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 ZBTB8BQ8NAP8 495 aaPredicted RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 RNF25Q96BH1 459 aaPredicted RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 BTBD6Q96KE9 485 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 SYT15Q9BQS2 421 aa10.83□□□□□ -0.67
BRD9-209ENST00000490814 INTS2Q9H0H0 1204 aaKnown RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 PABPC3Q9H361 631 aaKnown RBP10.83□□□□□ -0.67
BRD9-209ENST00000490814 FOXN3O00409 490 aaPredicted RBP10.83□□□□□ -0.68
BRD9-209ENST00000490814 KRT38O76015 456 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 FUT4P22083 530 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 GJC1P36383 396 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 GCLMP48507 274 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 CLK2P49760 499 aaKnown RBP10.83□□□□□ -0.68
BRD9-209ENST00000490814 COPS2P61201 443 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
BRD9-209ENST00000490814 KIAA1755Q5JYT7 1200 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 SEL1L2Q5TEA6 688 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 CDC42EP5Q6NZY7 148 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 DLK2Q6UY11 383 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 TAOK1Q7L7X3 1001 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 UBL4BQ8N7F7 174 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ALG3Q92685 438 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 KRT35Q92764 455 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 CENPTQ96BT3 561 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 PARVGQ9HBI0 331 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ETNK1Q9HBU6 452 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ACP6Q9NPH0 428 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ALG6Q9Y672 507 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 F5H6K3 240 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 GAS7O60861 476 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 RARAP10276 462 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 CXCL9Q07325 125 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 KLRC3Q07444 240 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 VSIG1Q86XK7 387 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
BRD9-209ENST00000490814 P2RX7Q99572 595 aaKnown RBP10.83□□□□□ -0.68
BRD9-209ENST00000490814 VCXQ9H320 206 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
BRD9-209ENST00000490814 BARX2Q9UMQ3 279 aaPredicted RBP10.83□□□□□ -0.68
BRD9-209ENST00000490814 FOXO6A8MYZ6 492 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 MEIS2O14770 477 aa10.82□□□□□ -0.68
BRD9-209ENST00000490814 GRIN3BO60391 1043 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms