RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NXF3Q9H4D5 531 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 SNTG2Q9NY99 539 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 C2CD2Q9Y426 696 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 A0A1B0GTH6 734 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 TTC26A0AVF1 554 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 ENPP3O14638 875 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 PMM2O15305 246 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 RECQL4O94761 1208 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 CXCL8P10145 99 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 TNFSF9P41273 254 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 UBASH3AP57075 661 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 OSTNP61366 133 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 CLDN10P78369 228 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 ZBTB41Q5SVQ8 909 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 PSRC1Q6PGN9 363 aaPredicted RBP14.36□□□□□ -0.11
SNX12-205ENST00000490561 CEP120Q8N960 986 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 SLC35C1Q96A29 364 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 SNX27Q96L92 541 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 LBHD1Q9BQE6 289 aaPredicted RBP14.36□□□□□ -0.11
SNX12-205ENST00000490561 NDST4Q9H3R1 872 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 TAB2Q9NYJ8 693 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 PARP2Q9UGN5 583 aa14.36□□□□□ -0.11
SNX12-205ENST00000490561 BRCA2P51587 3418 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 GTPBP10A4D1E9 387 aaKnown RBP14.35□□□□□ -0.11
SNX12-205ENST00000490561 LRRIQ3A6PVS8 624 aaPredicted RBP14.35□□□□□ -0.11
SNX12-205ENST00000490561 LGALS16A8MUM7 142 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 PES1O00541 588 aaKnown RBP14.35□□□□□ -0.11
SNX12-205ENST00000490561 TNNC2P02585 160 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 DLATP10515 647 aaKnown RBP14.35□□□□□ -0.11
SNX12-205ENST00000490561 CSF2RAP15509 400 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 TNNI1P19237 187 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 ITGB8P26012 769 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 DUOXA2Q1HG44 320 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 SLC10A6Q3KNW5 377 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 SEZ6Q53EL9 994 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 XKR4Q5GH76 650 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 APTXQ7Z2E3 356 aaKnown RBP14.35□□□□□ -0.11
SNX12-205ENST00000490561 ZNF598Q86UK7 904 aaKnown RBP14.35□□□□□ -0.11
SNX12-205ENST00000490561 LINC01599Q8WXQ3 324 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 CCDC127Q96BQ5 260 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 FAM212AQ96EL1 285 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 ANKRD36BP1Q96IX9 119 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 RPS6KC1Q96S38 1066 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 APOL6Q9BWW8 343 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 TRIM5Q9C035 493 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 VPS16Q9H269 839 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 RSAD1Q9HA92 442 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 TMEM8AQ9HCN3 771 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 PDE11AQ9HCR9 933 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 LRFN2Q9ULH4 789 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 PCDHB7Q9Y5E2 793 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
SNX12-205ENST00000490561 LACTBL1A8MY62 500 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 INPPL1O15357 1258 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 AMHP03971 560 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 TMEM191BP0C7N4 346 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 KCNE1P15382 129 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 FMO5P49326 533 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 MXI1P50539 228 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 TMEM132DQ14C87 1099 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 MIIPQ5JXC2 388 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 KRT39Q6A163 491 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 GLB1LQ6UWU2 654 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 ALKAL1Q6UXT8 129 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 RTN4RL1Q86UN2 441 aaPredicted RBP14.34□□□□□ -0.11
SNX12-205ENST00000490561 NPAS4Q8IUM7 802 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 TMEM192Q8IY95 271 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 URGCPQ8TCY9 931 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 BADQ92934 168 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
SNX12-205ENST00000490561 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
SNX12-205ENST00000490561 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 IFNKQ9P0W0 207 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 HES2Q9Y543 173 aa14.34□□□□□ -0.11
SNX12-205ENST00000490561 FGBP02675 491 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 TRIM49P0CI25 452 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 TRIM49CP0CI26 452 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 CYP3A5P20815 502 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 AKAP5P24588 427 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 KCNJ6P48051 423 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 MYL7Q01449 175 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 UBXN1Q04323 297 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 NR1I3Q14994 352 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 GBP6Q6ZN66 633 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 RNF169Q8NCN4 708 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 BEST2Q8NFU1 509 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 IQCDQ96DY2 449 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 MRFAP1L1Q96HT8 127 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 KANSL3Q9P2N6 904 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 UBQLN1Q9UMX0 589 aaKnown RBP14.33□□□□□ -0.12
SNX12-205ENST00000490561 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.12
SNX12-205ENST00000490561 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.12
SNX12-205ENST00000490561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms