RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RAP2AP10114 183 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 HOXA5P20719 270 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 FPR1P21462 350 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 MSX2P35548 267 aaPredicted RBP5.03□□□□□ -1.6
CD46-216ENST00000490278 IL12RB1P42701 662 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 MAP2K6P52564 334 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 TBX4P57082 545 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 CTXN1P60606 82 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 TLE1Q04724 770 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 FOXL1Q12952 345 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 NOGQ13253 232 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 HLTFQ14527 1009 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD46-216ENST00000490278 ATP2B3Q16720 1220 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 KHDC1Q4VXA5 237 aaKnown RBP5.03□□□□□ -1.6
CD46-216ENST00000490278 CCDC157Q569K6 752 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 AFMIDQ63HM1 303 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 GADL1Q6ZQY3 521 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 APBB1IPQ7Z5R6 666 aaPredicted RBP5.03□□□□□ -1.6
CD46-216ENST00000490278 PPP1R35Q8TAP8 253 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 CGRRF1Q99675 332 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 VRK1Q99986 396 aaPredicted RBP5.03□□□□□ -1.6
CD46-216ENST00000490278 SSBP3Q9BWW4 388 aaPredicted RBP5.03□□□□□ -1.6
CD46-216ENST00000490278 KCNH6Q9H252 994 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 RUVBL1Q9Y265 456 aaKnown RBP5.03□□□□□ -1.6
CD46-216ENST00000490278 SH3BP1Q9Y3L3 701 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 A0A0G2JLL6 359 aaPredicted RBP5.02□□□□□ -1.61
CD46-216ENST00000490278 LRRC14BA6NHZ5 514 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 PJA2O43164 708 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 B3GALT2O43825 422 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 ARIH2O95376 493 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 ITGB3P05106 788 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 MYBP10242 640 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 GNAT2P19087 354 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 GNALP38405 381 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 ALDH1A3P47895 512 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 HK3P52790 923 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 GRM3Q14832 879 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 OTUD7BQ6GQQ9 843 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 DOK3Q7L591 496 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 OVCH2Q7RTZ1 564 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 POLNQ7Z5Q5 900 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 FAM83AQ86UY5 434 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 D2HGDHQ8N465 521 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 CDK5RAP3Q96JB5 506 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 RBM15Q96T37 977 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD46-216ENST00000490278 HECAQ9UBI9 543 aaPredicted RBP5.02□□□□□ -1.61
CD46-216ENST00000490278 DDX20Q9UHI6 824 aaKnown RBP5.02□□□□□ -1.61
CD46-216ENST00000490278 HDAC5Q9UQL6 1122 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 NR2E3Q9Y5X4 410 aa5.02□□□□□ -1.61
CD46-216ENST00000490278 FRMPD2Q68DX3 1309 aaPredicted RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 TBKBP1A7MCY6 615 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 PATE3B3GLJ2 98 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 MFAP3LO75121 409 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 TUSC2O75896 110 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 IPO13O94829 963 aaKnown RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 SNRPA1P09661 255 aaKnown RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 ATP5JP18859 108 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 MALP21145 153 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 COMTP21964 271 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 HTR1BP28222 390 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 CLRN1P58418 232 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 ZNF280AP59817 542 aaPredicted RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 HHEXQ03014 270 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 CREMQ03060 361 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 NFIXQ14938 502 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 ELAVL1Q15717 326 aaKnown RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 ANKS6Q68DC2 871 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 SLC4A10Q6U841 1118 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 TTLL10Q6ZVT0 673 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 HEATR3Q7Z4Q2 680 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 XYLT1Q86Y38 959 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 PLXDC1Q8IUK5 500 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 ELOA2Q8IYF1 753 aaPredicted RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 SLC35B2Q8TB61 432 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 CPPED1Q9BRF8 314 aaPredicted RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 MRI1Q9BV20 369 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 LSM14BQ9BX40 385 aaKnown RBP5.01□□□□□ -1.61
CD46-216ENST00000490278 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 TMEM60Q9H2L4 133 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 FAM204AQ9H8W3 233 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 LMBRD1Q9NUN5 540 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 GABBR1Q9UBS5 961 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 PCDHA3Q9Y5H8 950 aa5.01□□□□□ -1.61
CD46-216ENST00000490278 FAM227AF5H4B4 570 aa5□□□□□ -1.61
CD46-216ENST00000490278 CAND2O75155 1236 aa5□□□□□ -1.61
CD46-216ENST00000490278 SMARCA1P28370 1054 aa5□□□□□ -1.61
CD46-216ENST00000490278 SNAPC2Q13487 334 aa5□□□□□ -1.61
CD46-216ENST00000490278 BMT2Q1RMZ1 405 aa5□□□□□ -1.61
CD46-216ENST00000490278 DACT2Q5SW24 774 aa5□□□□□ -1.61
CD46-216ENST00000490278 SEM1Q6ZVN7 128 aa5□□□□□ -1.61
CD46-216ENST00000490278 CHST15Q7LFX5 561 aaPredicted RBP5□□□□□ -1.61
CD46-216ENST00000490278 DAAM2Q86T65 1068 aa5□□□□□ -1.61
CD46-216ENST00000490278 ANKRD35Q8N283 1001 aa5□□□□□ -1.61
CD46-216ENST00000490278 MDGA1Q8NFP4 955 aa5□□□□□ -1.61
CD46-216ENST00000490278 DNERQ8NFT8 737 aa5□□□□□ -1.61
CD46-216ENST00000490278 Q8TCH9 128 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms