RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	C5orf42	Q9H799	3197 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	KCNJ18	B7U540	433 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	RPS6KA5	O75582	802 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	GNA14	O95837	355 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	NR2F2	P24468	414 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	PLCB2	Q00722	1185 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	HYAL1	Q12794	435 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	KCNJ12	Q14500	433 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	PUS10	Q3MIT2	529 aa	Known RBP	19.8	■□□□□ 0.76
SRM-206	ENST00000490101	HSP90AA4P	Q58FG1	418 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	APTX	Q7Z2E3	356 aa	Known RBP	19.8	■□□□□ 0.76
SRM-206	ENST00000490101	ADAMTS10	Q9H324	1103 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	FZD8	Q9H461	694 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101	MAGEC2	Q9UBF1	373 aa	Predicted RBP	19.8	■□□□□ 0.76
SRM-206	ENST00000490101	NOC2L	Q9Y3T9	749 aa	Known RBP	19.8	■□□□□ 0.76
SRM-206	ENST00000490101	KIAA1671	Q9BY89	1806 aa		19.8	■□□□□ 0.76
SRM-206	ENST00000490101		A0A087WZ62	844 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	ANKRD63	C9JTQ0	380 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	CLIC2	O15247	247 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	MGEA5	O60502	916 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	GTF2F1	P35269	517 aa	Known RBP eCLIP	19.79	■□□□□ 0.76
SRM-206	ENST00000490101	MARS	P56192	900 aa	Known RBP	19.79	■□□□□ 0.76
SRM-206	ENST00000490101	NLRP11	P59045	1033 aa	Known RBP	19.79	■□□□□ 0.76
SRM-206	ENST00000490101	MAPK6	Q16659	721 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	FAM187B	Q17R55	369 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	ZPBP2	Q6X784	338 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	SRGAP1	Q7Z6B7	1085 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	CRIPAK	Q8N1N5	446 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	ANKRD20A12P	Q8NF67	263 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	TMEM40	Q8WWA1	233 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	ANP32B	Q92688	251 aa	Known RBP	19.79	■□□□□ 0.76
SRM-206	ENST00000490101	CNOT6L	Q96LI5	555 aa	Known RBP	19.79	■□□□□ 0.76
SRM-206	ENST00000490101	FDXACB1	Q9BRP7	624 aa	Predicted RBP	19.79	■□□□□ 0.76
SRM-206	ENST00000490101	PLVAP	Q9BX97	442 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	TRIM5	Q9C035	493 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	ERVK-5	Q9HDB9	667 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	PLAGL2	Q9UPG8	496 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	STYXL1	Q9Y6J8	313 aa		19.79	■□□□□ 0.76
SRM-206	ENST00000490101	ACKR2	O00590	384 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	SLC16A3	O15427	465 aa	Known RBP	19.78	■□□□□ 0.76
SRM-206	ENST00000490101	GPR32	O75388	356 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	ADCY5	O95622	1261 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	SERPINC1	P01008	464 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	PRKCB	P05771	671 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	ZNF75D	P51815	510 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	MBTD1	Q05BQ5	628 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	COL19A1	Q14993	1142 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	KRT31	Q15323	416 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	KIZ	Q2M2Z5	673 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	SLC39A4	Q6P5W5	647 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	NLRP7	Q8WX94	980 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	EEF2KMT	Q96G04	330 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	ZNF668	Q96K58	619 aa	Predicted RBP	19.78	■□□□□ 0.76
SRM-206	ENST00000490101	OSMR	Q99650	979 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	MKNK1	Q9BUB5	465 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	MRPL4	Q9BYD3	311 aa	Known RBP	19.78	■□□□□ 0.76
SRM-206	ENST00000490101	PRMT7	Q9NVM4	692 aa	Predicted RBP	19.78	■□□□□ 0.76
SRM-206	ENST00000490101	FAM50B	Q9Y247	325 aa		19.78	■□□□□ 0.76
SRM-206	ENST00000490101	TISP43	B9A030	160 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	PI4K2B	G5E9Z4	385 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	INO80B-WBP1	J3KQ70	363 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	HNRNPDL	O14979	420 aa	Known RBP	19.77	■□□□□ 0.76
SRM-206	ENST00000490101	CBFA2T2	O43439	604 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	NCK2	O43639	380 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	ITGB1	P05556	798 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	GART	P22102	1010 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	DNAJB1	P25685	340 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	ADSS	P30520	456 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	LTBR	P36941	435 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	LIG4	P49917	911 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	DLX2	Q07687	328 aa	Predicted RBP	19.77	■□□□□ 0.76
SRM-206	ENST00000490101	SPOUT1	Q5T280	376 aa	Known RBP	19.77	■□□□□ 0.76
SRM-206	ENST00000490101	KLHL23	Q8NBE8	558 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	BICD1	Q96G01	975 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	ADAM2	Q99965	735 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	TARS2	Q9BW92	718 aa	Known RBP	19.77	■□□□□ 0.76
SRM-206	ENST00000490101	GCOM2	Q9BZD3	368 aa	Predicted RBP	19.77	■□□□□ 0.76
SRM-206	ENST00000490101	INO80B	Q9C086	356 aa	Predicted RBP	19.77	■□□□□ 0.76
SRM-206	ENST00000490101	MINDY3	Q9H8M7	445 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	C11orf16	Q9NQ32	467 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	IFNK	Q9P0W0	207 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	ST3GAL5	Q9UNP4	418 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	PCDHB7	Q9Y5E2	793 aa		19.77	■□□□□ 0.76
SRM-206	ENST00000490101	LINC01565	O15544	149 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	EDN1	P05305	212 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	PSMC2	P35998	433 aa	Known RBP	19.76	■□□□□ 0.75
SRM-206	ENST00000490101	CYP2J2	P51589	502 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	COPB1	P53618	953 aa	Known RBP	19.76	■□□□□ 0.75
SRM-206	ENST00000490101	UBASH3A	P57075	661 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	CAMK1	Q14012	370 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	AMHR2	Q16671	573 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	SLFN12L	Q6IEE8	588 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	ARMCX5	Q6P1M9	558 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	FRMD5	Q7Z6J6	570 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	MRFAP1L1	Q96HT8	127 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	PRIMPOL	Q96LW4	560 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	SCLT1	Q96NL6	688 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101	CBWD1	Q9BRT8	395 aa		19.76	■□□□□ 0.75
SRM-206	ENST00000490101		A0A1B0GTH6	734 aa		19.75	■□□□□ 0.75
SRM-206	ENST00000490101	TBKBP1	A7MCY6	615 aa		19.75	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms