RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PPM1LQ5SGD2 360 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 DCLRE1AQ6PJP8 1040 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 PADI6Q6TGC4 694 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 PARM1Q6UWI2 310 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 DLGAP2Q9P1A6 1054 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 CDH7Q9ULB5 785 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 R4GN57 208 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 FAM186AA6NE01 2351 aa17.52■□□□□ 0.39
PLOD3-216ENST00000489927 ACKR2O00590 384 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 CCL16O15467 120 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 CYP11B2P19099 503 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 GUCY1B3Q02153 619 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 EEF1DP3Q658K8 133 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 KCNG4Q8TDN1 519 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 ADPGKQ9BRR6 497 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 POLIQ9UNA4 740 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 GDAQ9Y2T3 454 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 FRYLO94915 3013 aa17.51■□□□□ 0.39
PLOD3-216ENST00000489927 GVINP1Q7Z2Y8 2422 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 ARHGEF35A5YM69 484 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 IGFBP6P24592 240 aaPredicted RBP17.5■□□□□ 0.39
PLOD3-216ENST00000489927 RPA1P27694 616 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 HOXA9P31269 272 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 NAMPTP43490 491 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 ID4P47928 161 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 NEK4P51957 841 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 GPC5P78333 572 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 ELAVL2Q12926 359 aaKnown RBP17.5■□□□□ 0.39
PLOD3-216ENST00000489927 PDXDC1Q6P996 788 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 ERMNQ8TAM6 284 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 DEPTORQ8TB45 409 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 SLC7A14Q8TBB6 771 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 FGF13Q92913 245 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 KIFC3Q9BVG8 833 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 FOXQ1Q9C009 403 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 SEMA4AQ9H3S1 761 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 ZNF292O60281 2723 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 DNAH14Q0VDD8 3507 aa17.5■□□□□ 0.39
PLOD3-216ENST00000489927 LMNAP02545 664 aaKnown RBP17.49■□□□□ 0.39
PLOD3-216ENST00000489927 GLULP15104 373 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 OR1D2P34982 312 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 STARD6P59095 220 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 RAB33AQ14088 237 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 SAFBQ15424 915 aaKnown RBP eCLIP17.49■□□□□ 0.39
PLOD3-216ENST00000489927 GLRA4Q5JXX5 417 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
PLOD3-216ENST00000489927 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.49■□□□□ 0.39
PLOD3-216ENST00000489927 ITFG1Q8TB96 612 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 POLD4Q9HCU8 107 aa17.49■□□□□ 0.39
PLOD3-216ENST00000489927 DMXL1Q9Y485 3027 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 XYLBO75191 536 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 LRRN2O75325 713 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 B3GAT3O94766 335 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 FGFR3P22607 806 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 CLCNKBP51801 687 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
PLOD3-216ENST00000489927 PPP2R5AQ15172 486 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 ZNF174Q15697 407 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 DCAF4L1Q3SXM0 396 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 SHDQ96IW2 340 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 PPP1R10Q96QC0 940 aaKnown RBP17.48■□□□□ 0.39
PLOD3-216ENST00000489927 HCFC1R1Q9NWW0 138 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 MTRRQ9UBK8 725 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 CDY1Q9Y6F8 540 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 COL4A3Q01955 1670 aa17.48■□□□□ 0.39
PLOD3-216ENST00000489927 TMEM189-UBE2V1I3L0A0 370 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 POU2F2P09086 479 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 SP9P0CG40 484 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
PLOD3-216ENST00000489927 EFNA5P52803 228 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 ECM1Q16610 540 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 ATF7IP2Q5U623 682 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 CD300LGQ6UXG3 332 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 RSPO2Q6UXX9 243 aaPredicted RBP17.47■□□□□ 0.39
PLOD3-216ENST00000489927 MTSS1LQ765P7 747 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 ERMP1Q7Z2K6 904 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 DNMT3BQ9UBC3 853 aaKnown RBP17.47■□□□□ 0.39
PLOD3-216ENST00000489927 DOCK6Q96HP0 2047 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 VWA8A3KMH1 1905 aa17.47■□□□□ 0.39
PLOD3-216ENST00000489927 I3L4J1 428 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 TKTP29401 623 aaKnown RBP17.46■□□□□ 0.39
PLOD3-216ENST00000489927 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
PLOD3-216ENST00000489927 UPP1Q16831 310 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 PABPC1LQ4VXU2 614 aaKnown RBP17.46■□□□□ 0.39
PLOD3-216ENST00000489927 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 ZC3H14Q6PJT7 736 aaKnown RBP17.46■□□□□ 0.39
PLOD3-216ENST00000489927 NPAS3Q8IXF0 933 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 C3orf58Q8NDZ4 430 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 KXD1Q9BQD3 176 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 DDX23Q9BUQ8 820 aaKnown RBP17.46■□□□□ 0.39
PLOD3-216ENST00000489927 BHMT2Q9H2M3 363 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 GOLGA2P5Q9HBQ8 144 aa17.46■□□□□ 0.39
PLOD3-216ENST00000489927 MYH15Q9Y2K3 1946 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms