RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NEPROQ6NW34 567 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 KLHL35Q6PF15 583 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TMTC3Q6ZXV5 915 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 VASH1Q7L8A9 365 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 PHLDB2Q86SQ0 1253 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 RSPH3Q86UC2 560 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 SCAIQ8N9R8 606 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 LSM14AQ8ND56 463 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 GIMAP8Q8ND71 665 aaPredicted RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 IGDCC4Q8TDY8 1250 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 GAB3Q8WWW8 586 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 DHX38Q92620 1227 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 STAMQ92783 540 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 STMN2Q93045 179 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 ATP6V0A1Q93050 837 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 COL26A1Q96A83 441 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 VTI1AQ96AJ9 217 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 NMD3Q96D46 503 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 ERP27Q96DN0 273 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 DYDC2Q96IM9 177 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 SERPINB12Q96P63 405 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TGS1Q96RS0 853 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 ERP44Q9BS26 406 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TINF2Q9BSI4 451 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 AP1M1Q9BXS5 423 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 DDX47Q9H0S4 455 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TMEM60Q9H2L4 133 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 QTRT2Q9H974 415 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 GPR108Q9NPR9 543 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 AMACRQ9UHK6 382 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 DBR1Q9UK59 544 aaKnown RBP5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 KCNJ14Q9UNX9 436 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 CHKBQ9Y259 395 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 MYPNQ86TC9 1320 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 PITPNM2Q9BZ72 1349 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 PLEKHG1Q9ULL1 1385 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 DISP2A7MBM2 1401 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 LRP6O75581 1613 aa5.08□□□□□ -1.6
SNRNP40-206ENST00000489853 TMEM120BA0PK00 339 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC53A6NM62 1247 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 F8W8V4 182 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 MATN2O00339 956 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 OPHN1O60890 802 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 KRT36O76013 467 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PDE5AO76074 875 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RHOBTB3O94955 611 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DEXIO95424 95 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DDX58O95786 925 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PDGFRBP09619 1106 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ZBTB48P10074 688 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 KLRC1P26715 233 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CRABP2P29373 138 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 STIP1P31948 543 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 IGHMBP2P38935 993 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 LIFRP42702 1097 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RPL5P46777 297 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RFX5P48382 616 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DNA2P51530 1060 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 GALK1P51570 392 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ARFIP2P53365 341 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PLCB3Q01970 1234 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 DSG1Q02413 1049 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 KIF22Q14807 665 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC14Q15048 493 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CLUL1Q15846 466 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CWF19L2Q2TBE0 894 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CERKLQ49MI3 558 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 VWA3BQ502W6 1294 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC45A4Q5BKX6 768 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SYCP2LQ5T4T6 812 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SOGA3Q5TF21 947 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 VSTM1Q6UX27 236 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ARHGEF18Q6ZSZ5 1173 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ACAD11Q709F0 780 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CYB5R4Q7L1T6 521 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 MIGA2Q7L4E1 593 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SAPCD2Q86UD0 394 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SLC9A9Q8IVB4 645 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SEPT12Q8IYM1 358 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ESR2Q92731 530 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ARHGEF2Q92974 986 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 P2RX5Q93086 422 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 OSBP2Q969R2 916 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NUDT16Q96DE0 195 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NGLY1Q96IV0 654 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 VPS50Q96JG6 964 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 CNOT6LQ96LI5 555 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ZMAT2Q96NC0 199 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 RUNDC3BQ96NL0 473 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 FNBP1Q96RU3 617 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ECSITQ9BQ95 431 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 BTBD10Q9BSF8 475 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 NIF3L1Q9GZT8 377 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 KCNK9Q9NPC2 374 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 ZDHHC7Q9NXF8 308 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 SCHIP1Q9P0W5 487 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 VTI1BQ9UEU0 232 aa5.07□□□□□ -1.6
SNRNP40-206ENST00000489853 MTRF1LQ9UGC7 380 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms