RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 REPS2Q8NFH8 660 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 MDGA1Q8NFP4 955 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 ZFP28Q8NHY6 868 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 Q8TCH9 128 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 EDAQ92838 391 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 TSR2Q969E8 191 aaKnown RBP7.26□□□□□ -1.25
VPS26A-206ENST00000489794 TMX3Q96JJ7 454 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 CLPTM1LQ96KA5 538 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 CPPED1Q9BRF8 314 aaPredicted RBP7.26□□□□□ -1.25
VPS26A-206ENST00000489794 DEF6Q9H4E7 631 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 FAM30AQ9NZY2 134 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 PCDHB1Q9Y5F3 818 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 ATRNL1Q5VV63 1379 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 TBKBP1A7MCY6 615 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 H3BML4 177 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 ATF3P18847 181 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 ATP8B2P98198 1209 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 DSC2Q02487 901 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 CREMQ03060 361 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 HLTFQ14527 1009 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS26A-206ENST00000489794 MFSD14BQ5SR56 506 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 DRICH1Q6PGQ1 229 aaPredicted RBP7.25□□□□□ -1.25
VPS26A-206ENST00000489794 B3GNT9Q6UX72 402 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 MAMDC4Q6UXC1 1216 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 GRAMD1CQ8IYS0 662 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 DIS3LQ8TF46 1054 aaKnown RBP7.25□□□□□ -1.25
VPS26A-206ENST00000489794 KAT5Q92993 513 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 RGMAQ96B86 450 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 LOXL4Q96JB6 756 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 MRGPRX4Q96LA9 322 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 LRGUKQ96M69 825 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
VPS26A-206ENST00000489794 CDK5RAP1Q96SZ6 601 aaKnown RBP7.25□□□□□ -1.25
VPS26A-206ENST00000489794 PRDM11Q9NQV5 511 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 C1orf112Q9NSG2 853 aa7.25□□□□□ -1.25
VPS26A-206ENST00000489794 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
VPS26A-206ENST00000489794 CAPN14A8MX76 684 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 AMY1AP04745 511 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 RAP2AP10114 183 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 ATP5JP18859 108 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 SELENOPP49908 381 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 FXR1P51114 621 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS26A-206ENST00000489794 CLRN1P58418 232 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 TARDBPQ13148 414 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS26A-206ENST00000489794 BMT2Q1RMZ1 405 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 AFMIDQ63HM1 303 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 SEM1Q6ZVN7 128 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 GPRIN1Q7Z2K8 1008 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 CAMKK1Q8N5S9 505 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 NLGN4YQ8NFZ3 816 aaPredicted RBP7.24□□□□□ -1.25
VPS26A-206ENST00000489794 IFI44Q8TCB0 444 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 CEP95Q96GE4 821 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 TAAR9Q96RI9 348 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 LDAHQ9H6V9 325 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 CD248Q9HCU0 757 aa7.24□□□□□ -1.25
VPS26A-206ENST00000489794 CXorf49A8MYA2 514 aaPredicted RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 GOLGA6L6A8MZA4 724 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 FOXD2O60548 495 aaPredicted RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 CTNND1O60716 968 aaKnown RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 STC2O76061 302 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 FTLP02792 175 aaPredicted RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 ALAS1P13196 640 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 ACO1P21399 889 aaKnown RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 ALDH1A3P47895 512 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 HK3P52790 923 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 ICAM4Q14773 271 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 FAM214AQ32MH5 1076 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 EFCAB12Q6NXP0 572 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 PLXDC1Q8IUK5 500 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 DENND1CQ8IV53 801 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 TTC8Q8TAM2 541 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 RUNDC1Q96C34 613 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 CDK5RAP3Q96JB5 506 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 MRI1Q9BV20 369 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 C11orf54Q9H0W9 315 aaPredicted RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 KCNH6Q9H252 994 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 ANLNQ9NQW6 1124 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 GNL3LQ9NVN8 582 aaKnown RBP7.23□□□□□ -1.25
VPS26A-206ENST00000489794 SMPD4Q9NXE4 827 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 JAG2Q9Y219 1238 aa7.23□□□□□ -1.25
VPS26A-206ENST00000489794 AMHP03971 560 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 MTHFD1P11586 935 aaKnown RBP7.22□□□□□ -1.25
VPS26A-206ENST00000489794 SMARCA1P28370 1054 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 PCSK1P29120 753 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 TLE1Q04724 770 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 ZNF267Q14586 743 aaPredicted RBP7.22□□□□□ -1.25
VPS26A-206ENST00000489794 NAIF1Q69YI7 327 aaPredicted RBP7.22□□□□□ -1.25
VPS26A-206ENST00000489794 HTR3DQ70Z44 454 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 OR52N2Q8NGI0 321 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 STON2Q8WXE9 905 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 TFAP2CQ92754 450 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 MTFMTQ96DP5 389 aaKnown RBP7.22□□□□□ -1.25
VPS26A-206ENST00000489794 LSM14BQ9BX40 385 aaKnown RBP7.22□□□□□ -1.25
VPS26A-206ENST00000489794 WDCPQ9H6R7 721 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 SIDT1Q9NXL6 827 aaKnown RBP7.22□□□□□ -1.25
VPS26A-206ENST00000489794 ACTL7AQ9Y615 435 aa7.22□□□□□ -1.25
VPS26A-206ENST00000489794 PRPF3O43395 683 aaKnown RBP7.21□□□□□ -1.26
VPS26A-206ENST00000489794 POMCP01189 267 aa7.21□□□□□ -1.26
VPS26A-206ENST00000489794 FPR1P21462 350 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms