RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CDR2LQ86X02 465 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-205ENST00000489656 WDR49Q8IV35 697 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 FAM126BQ8IXS8 530 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 CEP120Q8N960 986 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 USP38Q8NB14 1042 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 EHBP1Q8NDI1 1231 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 LMO3Q8TAP4 145 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 CAGE1Q8TC20 777 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 TRPV6Q9H1D0 765 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 TMX1Q9H3N1 280 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
VPS26A-205ENST00000489656 PDE11AQ9HCR9 933 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 SIX2Q9NPC8 291 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 CHST12Q9NRB3 414 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 FAM207AQ9NSI2 230 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-205ENST00000489656 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
VPS26A-205ENST00000489656 RNF225M0QZC1 329 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 EPHB6O15197 1021 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 NRDCO43847 1150 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 MYCP01106 439 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 CD4P01730 458 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 C4BPAP04003 597 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 CTSHP09668 335 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 RFX1P22670 979 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 KRT9P35527 623 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ADKP55263 362 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 CCZ1BP86790 482 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 CCZ1P86791 482 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ZACNQ401N2 412 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 SEZ6Q53EL9 994 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 C1orf53Q5VUE5 145 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 TRAF7Q6Q0C0 670 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 SV2AQ7L0J3 742 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ZNF397Q8NF99 534 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 BAP1Q92560 729 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ZNF516Q92618 1163 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 POP1Q99575 1024 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 INTS2Q9H0H0 1204 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 NUCKS1Q9H1E3 243 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ASB7Q9H672 318 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ABHD10Q9NUJ1 306 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 MYO6Q9UM54 1294 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 PIN4Q9Y237 131 aaKnown RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 ZKSCAN5Q9Y2L8 839 aa15.33■□□□□ 0.04
VPS26A-205ENST00000489656 FARP1Q9Y4F1 1045 aaPredicted RBP15.33■□□□□ 0.04
VPS26A-205ENST00000489656 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 GPR182O15218 404 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 NPTXRO95502 500 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 COL6A1P12109 1028 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 CKBP12277 381 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 TNNI1P19237 187 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 HNRNPH3P31942 346 aaKnown RBP15.32■□□□□ 0.04
VPS26A-205ENST00000489656 GJA8P48165 433 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 LRMPQ12912 555 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 UBXN11Q5T124 520 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 FAM43BQ6ZT52 329 aaPredicted RBP15.32■□□□□ 0.04
VPS26A-205ENST00000489656 NT5DC4Q86YG4 428 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 TMEM139Q8IV31 216 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 CD302Q8IX05 232 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 TMEM192Q8IY95 271 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 OR8K1Q8NGG5 319 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 CPLX3Q8WVH0 158 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 SYN2Q92777 582 aaPredicted RBP15.32■□□□□ 0.04
VPS26A-205ENST00000489656 ACAP3Q96P50 834 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
VPS26A-205ENST00000489656 NAA15Q9BXJ9 866 aaKnown RBP15.32■□□□□ 0.04
VPS26A-205ENST00000489656 PLEKHA5Q9HAU0 1116 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 ERVK-5Q9HDB9 667 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 ST3GAL5Q9UNP4 418 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 PTPRJQ12913 1337 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 SCN1AP35498 2009 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 MICAL3Q7RTP6 2002 aa15.32■□□□□ 0.04
VPS26A-205ENST00000489656 TET1Q8NFU7 2136 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-205ENST00000489656 ZC3H11AO75152 810 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS26A-205ENST00000489656 TFRCP02786 760 aaKnown RBP15.31■□□□□ 0.04
VPS26A-205ENST00000489656 CXCL8P10145 99 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 UCHL3P15374 230 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 KCNJ6P48051 423 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 GOLGA8FQ08AF8 430 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 GOLGA8DPQ0D2H9 430 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 LPIN1Q14693 890 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 SLC10A6Q3KNW5 377 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 TDRD10Q5VZ19 366 aaKnown RBP15.31■□□□□ 0.04
VPS26A-205ENST00000489656 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 CACNA2D4Q7Z3S7 1137 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-205ENST00000489656 TOX2Q96NM4 488 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 TSPAN18Q96SJ8 248 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 TRAIPQ9BWF2 469 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 EIF2AQ9BY44 585 aaKnown RBP15.31■□□□□ 0.04
VPS26A-205ENST00000489656 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms