RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 FAM171A1Q5VUB5 890 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 PHLDB3Q6NSJ2 640 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 NXPE3Q969Y0 559 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 PRIMPOLQ96LW4 560 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 KIFC3Q9BVG8 833 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 TUFT1Q9NNX1 390 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
CSF3R-213ENST00000489551 HCFC1R1Q9NWW0 138 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 DPP7Q9UHL4 492 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 CEP250Q9BV73 2442 aa11.13□□□□□ -0.63
CSF3R-213ENST00000489551 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSF3R-213ENST00000489551 GPR179Q6PRD1 2367 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 STK25O00506 426 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 NRG2O14511 850 aaPredicted RBP11.12□□□□□ -0.63
CSF3R-213ENST00000489551 CCL16O15467 120 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 PRKCBP05771 671 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 THP07101 528 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 FSHRP23945 695 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 STARD6P59095 220 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 ANKRD1Q15327 319 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 PSMD5Q16401 504 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 C4orf32Q8N8J7 132 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 FGF13Q92913 245 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 PPP1R10Q96QC0 940 aaKnown RBP11.12□□□□□ -0.63
CSF3R-213ENST00000489551 POLR3CQ9BUI4 534 aaPredicted RBP11.12□□□□□ -0.63
CSF3R-213ENST00000489551 GOLGA2P5Q9HBQ8 144 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 BRMS1Q9HCU9 246 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
CSF3R-213ENST00000489551 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
CSF3R-213ENST00000489551 TICRRQ7Z2Z1 1910 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 ACKR2O00590 384 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 N4BP3O15049 544 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
CSF3R-213ENST00000489551 SEC24BO95487 1268 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 C8AP07357 584 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 SP9P0CG40 484 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 CYP11B2P19099 503 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 FGFR3P22607 806 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 RPA1P27694 616 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 OR1D2P34982 312 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 SOX4Q06945 474 aaPredicted RBP11.11□□□□□ -0.63
CSF3R-213ENST00000489551 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
CSF3R-213ENST00000489551 ZNF174Q15697 407 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 GLRA4Q5JXX5 417 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 CEP120Q8N960 986 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 MCPH1Q8NEM0 835 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 PJA1Q8NG27 643 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
CSF3R-213ENST00000489551 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 DDX23Q9BUQ8 820 aaKnown RBP11.11□□□□□ -0.63
CSF3R-213ENST00000489551 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
CSF3R-213ENST00000489551 CDH7Q9ULB5 785 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 SIT1Q9Y3P8 196 aa11.11□□□□□ -0.63
CSF3R-213ENST00000489551 TMEM189-UBE2V1I3L0A0 370 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 I3L4J1 428 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSF3R-213ENST00000489551 LIG1P18858 919 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 TKTP29401 623 aaKnown RBP11.1□□□□□ -0.63
CSF3R-213ENST00000489551 HOXA9P31269 272 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 NAMPTP43490 491 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 BRCC3P46736 316 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 ID4P47928 161 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 CLCNKBP51801 687 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 CREMQ03060 361 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 SNW1Q13573 536 aaKnown RBP11.1□□□□□ -0.63
CSF3R-213ENST00000489551 RAB33AQ14088 237 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 NBR1Q14596 966 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 SLC5A9Q2M3M2 681 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 PPM1LQ5SGD2 360 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
CSF3R-213ENST00000489551 ELMSAN1Q6PJG2 1045 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 ALKAL1Q6UXT8 129 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 TAS1R3Q7RTX0 852 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 DAW1Q8N136 415 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 DCLK2Q8N568 766 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 SLC7A14Q8TBB6 771 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 MTRRQ9UBK8 725 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 F5P12259 2224 aa11.1□□□□□ -0.63
CSF3R-213ENST00000489551 KIF26AQ9ULI4 1882 aaPredicted RBP11.1□□□□□ -0.63
CSF3R-213ENST00000489551 ABLIM1O14639 778 aa11.09□□□□□ -0.63
CSF3R-213ENST00000489551 LMNAP02545 664 aaKnown RBP11.09□□□□□ -0.63
CSF3R-213ENST00000489551 OR52Z1P0C646 297 aa11.09□□□□□ -0.63
CSF3R-213ENST00000489551 CD72P21854 359 aa11.09□□□□□ -0.63
CSF3R-213ENST00000489551 NEK4P51957 841 aa11.09□□□□□ -0.63
CSF3R-213ENST00000489551 FZD5Q13467 585 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms