RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 SMARCAD1Q9H4L7 1026 aa9.71□□□□□ -0.86
EXOSC1-211ENST00000489158 LUC7LQ9NQ29 371 aaKnown RBP9.71□□□□□ -0.86
EXOSC1-211ENST00000489158 HAUS2Q9NVX0 235 aa9.71□□□□□ -0.86
EXOSC1-211ENST00000489158 CEP72Q9P209 647 aa9.71□□□□□ -0.86
EXOSC1-211ENST00000489158 CNOT8Q9UFF9 292 aaKnown RBP9.71□□□□□ -0.86
EXOSC1-211ENST00000489158 PCDHGC5Q9Y5F6 944 aa9.71□□□□□ -0.86
EXOSC1-211ENST00000489158 A0A087X0T9 212 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 KCNK3O14649 394 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 TRAPPC3O43617 180 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 ATP2C2O75185 946 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 GNRH1P01148 92 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 FAM228BP0C875 321 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 ELF1P32519 619 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 ABCD1P33897 745 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 CTNNA1P35221 906 aaKnown RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 RFC5P40937 340 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 PSMC4P43686 418 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 RTP1P59025 263 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SP3Q02447 781 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 KIAA0753Q2KHM9 967 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 ANKRD20A8PQ5CZ79 823 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 GJC2Q5T442 439 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 FAM102BQ5T8I3 360 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 WLSQ5T9L3 541 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 FUKQ8N0W3 1084 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 RAPGEF5Q92565 580 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 KIFAP3Q92845 792 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 TACO1Q9BSH4 297 aaKnown RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 NEUROG2Q9H2A3 272 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SAGE1Q9NXZ1 904 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SLC12A6Q9UHW9 1150 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 TMEM59LQ9UK28 342 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 Q9Y3F1 56 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 GAS2O43903 313 aaKnown RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 HOXD8P13378 290 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 MARK3P27448 753 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 CASP5P51878 434 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 POLGP54098 1239 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 PPP2R2AP63151 447 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 MAPK7Q13164 816 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 BYSLQ13895 437 aaKnown RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 RAPGEF1Q13905 1077 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 RPS6KA1Q15418 735 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SLC18A3Q16572 532 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 PTPROQ16827 1216 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 CYB5D1Q6P9G0 228 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 EPM2AIP1Q7L775 607 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 FAM228AQ86W67 206 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 CEP57Q86XR8 500 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SCFD1Q8WVM8 642 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 UBLCP1Q8WVY7 318 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SYN2Q92777 582 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 N4BP2L2Q92802 583 aaPredicted RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 LRRC45Q96CN5 670 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 SCLT1Q96NL6 688 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 PCYT2Q99447 389 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 AP1M1Q9BXS5 423 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 NUCKS1Q9H1E3 243 aaKnown RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 ST6GALNAC4Q9H4F1 302 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 GPRC5CQ9NQ84 441 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 FBXL5Q9UKA1 691 aa9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 NOVA2Q9UNW9 492 aaKnown RBP9.7□□□□□ -0.86
EXOSC1-211ENST00000489158 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 K7ENM7 598 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 KIF1CO43896 1103 aaKnown RBP9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 CEP104O60308 925 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 ZNF865P0CJ78 1059 aaPredicted RBP9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 PLS3P13797 630 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 HOXD10P28358 340 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 NMT1P30419 496 aaKnown RBP9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 FLT3P36888 993 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 SCTRP47872 440 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 VEGFBP49765 207 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 TNFAIP2Q03169 654 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 BIRC3Q13489 604 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 CUL1Q13616 776 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 CCL14Q16627 93 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 PRAMEF19Q5SWL8 479 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 RUFY4Q6ZNE9 571 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 TRIM50Q86XT4 487 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 CACNA2D3Q8IZS8 1091 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 C3orf20Q8ND61 904 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 ATP8B4Q8TF62 1192 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 GOLPH3Q9H4A6 298 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 PDLIM7Q9NR12 457 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 RNF186Q9NXI6 227 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 ERAP1Q9NZ08 941 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 ADAMTS1Q9UHI8 967 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 TPX2Q9ULW0 747 aaKnown RBP9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 PCDHB13Q9Y5F0 798 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 ZSWIM8A7E2V4 1837 aa9.69□□□□□ -0.86
EXOSC1-211ENST00000489158 C5orf60A6NFR6 353 aa9.68□□□□□ -0.86
EXOSC1-211ENST00000489158 H0YCG3 227 aa9.68□□□□□ -0.86
EXOSC1-211ENST00000489158 HBP1O60381 514 aa9.68□□□□□ -0.86
EXOSC1-211ENST00000489158 KIF4AO95239 1232 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms