RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TFDP1Q14186 410 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
USP48-210ENST00000489108 EPHA7Q15375 998 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 UVSSAQ2YD98 709 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 TANGO2Q6ICL3 276 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 SLC27A1Q6PCB7 646 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 ASAP3Q8TDY4 903 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 DYDC2Q96IM9 177 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
USP48-210ENST00000489108 KCNMB3Q9NPA1 279 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 NDRG2Q9UN36 371 aaKnown RBP17.97■□□□□ 0.47
USP48-210ENST00000489108 MRPS23Q9Y3D9 190 aaKnown RBP17.97■□□□□ 0.47
USP48-210ENST00000489108 ARID2Q68CP9 1835 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 POU2F2P09086 479 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 OR1D2P34982 312 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 NRLP54845 237 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 POU5F1BQ06416 359 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 CAPSQ13938 189 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 RAB33AQ14088 237 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 NPY5RQ15761 445 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 LAIR1Q6GTX8 287 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 ZNF687Q8N1G0 1237 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 CELF5Q8N6W0 485 aaKnown RBP17.96■□□□□ 0.47
USP48-210ENST00000489108 NETO1Q8TDF5 533 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 RALGAPA1Q6GYQ0 2036 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 VWA8A3KMH1 1905 aa17.96■□□□□ 0.47
USP48-210ENST00000489108 USP24Q9UPU5 2620 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 A0A1B0GUA9 196 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 PDIA3P30101 505 aaKnown RBP17.95■□□□□ 0.46
USP48-210ENST00000489108 CYP4A11Q02928 519 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
USP48-210ENST00000489108 SLC5A9Q2M3M2 681 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 BLOC1S2Q6QNY1 142 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 FBXL16Q8N461 479 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 HAS1Q92839 578 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 AGXT2Q9BYV1 514 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 CXCL16Q9H2A7 254 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 CHRDQ9H2X0 955 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 ZSWIM4Q9H7M6 989 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 CHD6Q8TD26 2715 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 F5P12259 2224 aa17.95■□□□□ 0.46
USP48-210ENST00000489108 ZMYM2Q9UBW7 1377 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 RETP07949 1114 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 RHOP08100 348 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 IGFBP6P24592 240 aaPredicted RBP17.94■□□□□ 0.46
USP48-210ENST00000489108 ARL2P36404 184 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 NCAPH2Q6IBW4 605 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 MAMSTRQ6ZN01 415 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 PRR23BQ6ZRT6 265 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 TPH2Q8IWU9 490 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 DAGLBQ8NCG7 672 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 KCNB2Q92953 911 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 ELSPBP1Q96BH3 223 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 AIFM3Q96NN9 605 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 LMAN1LQ9HAT1 526 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 GDE1Q9NZC3 331 aa17.94■□□□□ 0.46
USP48-210ENST00000489108 PTGESO14684 152 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 SLITRK3O94933 977 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 THP07101 528 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 GLRA2P23416 452 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 ELAVL2Q12926 359 aaKnown RBP17.93■□□□□ 0.46
USP48-210ENST00000489108 GRM2Q14416 872 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 PDXDC1Q6P996 788 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 KRT25Q7Z3Z0 450 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 DNASE1L2Q92874 299 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 NFKBIZQ9BYH8 718 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 BRD9Q9H8M2 597 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 SEMA4GQ9NTN9 838 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 RALYQ9UKM9 306 aaKnown RBP17.93■□□□□ 0.46
USP48-210ENST00000489108 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
USP48-210ENST00000489108 MAN2B1O00754 1011 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 MARCH6O60337 910 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 GDF9O60383 454 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 LRP3O75074 770 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 CEBPBP17676 345 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 RPS6KB1P23443 525 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 PPP2R5DQ14738 602 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 NAB2Q15742 525 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 PPP4R3AQ6IN85 833 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 GALNT17Q6IS24 598 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.92■□□□□ 0.46
USP48-210ENST00000489108 PRR23CQ6ZRP0 262 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 RTL10Q7L3V2 364 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 SNTG2Q9NY99 539 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 KCNJ14Q9UNX9 436 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 CDY1Q9Y6F8 540 aa17.92■□□□□ 0.46
USP48-210ENST00000489108 NRG2O14511 850 aaPredicted RBP17.91■□□□□ 0.46
USP48-210ENST00000489108 HRO43593 1189 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 CCNT1O60563 726 aaKnown RBP17.91■□□□□ 0.46
USP48-210ENST00000489108 DEXIO95424 95 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 PTPN2P17706 415 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 KCNA4P22459 653 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 FGFR3P22607 806 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 FCARP24071 287 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 EVCP57679 992 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
USP48-210ENST00000489108 SPIRE1Q08AE8 756 aa17.91■□□□□ 0.46
USP48-210ENST00000489108 SIM2Q14190 667 aaPredicted RBP17.91■□□□□ 0.46
USP48-210ENST00000489108 CSRP2Q16527 193 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms