RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 PFKFB2O60825 505 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 THP07101 528 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 CD72P21854 359 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 KRT2P35908 639 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 PRKCQQ04759 706 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 RAB33AQ14088 237 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 NAB2Q15742 525 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 CALCRLQ16602 461 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-207ENST00000488966 CDCA2Q69YH5 1023 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-207ENST00000488966 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 NPAS3Q8IXF0 933 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 FZD8Q9H461 694 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 PDZD7Q9H5P4 517 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 PRMT7Q9NVM4 692 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-207ENST00000488966 DNMT3BQ9UBC3 853 aaKnown RBP11.92□□□□□ -0.5
YIPF3-207ENST00000488966 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-207ENST00000488966 FBXO4Q9UKT5 387 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 CACNA1AO00555 2505 aa11.92□□□□□ -0.5
YIPF3-207ENST00000488966 LAMTOR5O43504 91 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 XYLBO75191 536 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 POU2F2P09086 479 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 SPATA31C1P0DKV0 1188 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 XRCC6P12956 609 aaKnown RBP eCLIP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 TARSP26639 723 aaKnown RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 OR1D2P34982 312 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 TXKP42681 527 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 PFKPQ01813 784 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 CSTF1Q05048 431 aaKnown RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 FAM187BQ17R55 369 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 RSPO4Q2I0M5 234 aaPredicted RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 ZNF528Q3MIS6 628 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 POTEHQ6S545 545 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 RSPO2Q6UXX9 243 aaPredicted RBP11.91□□□□□ -0.5
YIPF3-207ENST00000488966 ING5Q8WYH8 240 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 BSNDQ8WZ55 320 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 MTMR9Q96QG7 549 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 OSBPL6Q9BZF3 934 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 LTB4R2Q9NPC1 389 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 GPR179Q6PRD1 2367 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 OTOGLQ3ZCN5 2332 aa11.91□□□□□ -0.5
YIPF3-207ENST00000488966 N4BP3O15049 544 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 EDN1P05305 212 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 FGFR3P22607 806 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 PRPF4BQ13523 1007 aaKnown RBP11.9□□□□□ -0.5
YIPF3-207ENST00000488966 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 UVSSAQ2YD98 709 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
YIPF3-207ENST00000488966 GLRA4Q5JXX5 417 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 EEF1DP3Q658K8 133 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.9□□□□□ -0.5
YIPF3-207ENST00000488966 ZBTB8OSQ8IWT0 167 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 PLA2G2FQ9BZM2 168 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 NCDNQ9UBB6 729 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 MTRRQ9UBK8 725 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 GDAQ9Y2T3 454 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
YIPF3-207ENST00000488966 CDY1Q9Y6F8 540 aa11.9□□□□□ -0.5
YIPF3-207ENST00000488966 ARID2Q68CP9 1835 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 BTBD18B2RXH4 712 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 I3L4J1 428 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 SPTLC1O15269 473 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 NEMFO60524 1076 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 MED24O75448 989 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 B3GAT3O94766 335 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 PRKCBP05771 671 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 LIG1P18858 919 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 ATP2B1P20020 1258 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 MAPK6Q16659 721 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 SLC5A9Q2M3M2 681 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 ZBTB41Q5SVQ8 909 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 TSSK4Q6SA08 328 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 CD300LGQ6UXG3 332 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 TPRG1Q6ZUI0 275 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 CATSPER3Q86XQ3 398 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 ZBTB44Q8NCP5 570 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 MCPH1Q8NEM0 835 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 ATRIPQ8WXE1 791 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 WASF1Q92558 559 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 CLDN23Q96B33 292 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 MCRS1Q96EZ8 462 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 CCDC113Q9H0I3 377 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 C2orf40Q9H1Z8 148 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 BRMS1Q9HCU9 246 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 PCDHGA2Q9Y5H1 932 aa11.89□□□□□ -0.51
YIPF3-207ENST00000488966 CACNA1IQ9P0X4 2223 aa11.88□□□□□ -0.51
YIPF3-207ENST00000488966 ZNF292O60281 2723 aa11.88□□□□□ -0.51
YIPF3-207ENST00000488966 DNAH14Q0VDD8 3507 aa11.88□□□□□ -0.51
YIPF3-207ENST00000488966 TMEM189-UBE2V1I3L0A0 370 aa11.88□□□□□ -0.51
YIPF3-207ENST00000488966 ACKR2O00590 384 aa11.88□□□□□ -0.51
YIPF3-207ENST00000488966 ECI2O75521 394 aa11.88□□□□□ -0.51
YIPF3-207ENST00000488966 RHOP08100 348 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms