RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 CCDC94Q9BW85 323 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 SMOC2Q9H3U7 446 aa13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 C17orf75Q9HAS0 396 aa13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 DPP7Q9UHL4 492 aa13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
CCHCR1-215ENST00000488920 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 VPS37CA5D8V6 355 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 B3GAT3O94766 335 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 BRD1O95696 1058 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 HARSP12081 509 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 UBA7P41226 1012 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 CLCNKBP51801 687 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 SMTNP53814 917 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 YARSP54577 528 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 GRIN1Q05586 938 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 STRN3Q13033 797 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 DHX8Q14562 1220 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 LILRA6Q6PI73 481 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 DCLRE1AQ6PJP8 1040 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 ALKAL1Q6UXT8 129 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 BRAPQ7Z569 592 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 TMEM161BQ8NDZ6 487 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 LNX1Q8TBB1 728 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 ACSF2Q96CM8 615 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 AK8Q96MA6 479 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 PLEKHA4Q9H4M7 779 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 GOLGA2P5Q9HBQ8 144 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
CCHCR1-215ENST00000488920 ABLIM1O14639 778 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 ADAM12O43184 909 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 MAPTP10636 758 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 MCF2P10911 925 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 PROZP22891 400 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 CREMQ03060 361 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 ELAVL2Q12926 359 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 PSMD5Q16401 504 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 UPP1Q16831 310 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 IER5LQ5T953 404 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 MPZL3Q6UWV2 235 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 CD300LGQ6UXG3 332 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 UBALD2Q8IYN6 164 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 FBXL6Q8N531 539 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 LRRC15Q8TF66 581 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 HDAC7Q8WUI4 952 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 PIK3R5Q8WYR1 880 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 SMG7Q92540 1137 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 ZNF707Q96C28 371 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 CALML4Q96GE6 196 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 ZMAT2Q96NC0 199 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 PIDD1Q9HB75 910 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 TOPORSQ9NS56 1045 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 DAXXQ9UER7 740 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 TECTAO75443 2155 aa13.08□□□□□ -0.32
CCHCR1-215ENST00000488920 I3L4J1 428 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 N4BP1O75113 896 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 BMP15O95972 392 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 C1RP00736 705 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 SOX4Q06945 474 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 MCM6Q14566 821 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 KARSQ15046 597 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 SEZ6Q53EL9 994 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 XKR4Q5GH76 650 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 GPBP1Q86WP2 473 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 RASSF8Q8NHQ8 419 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 UROC1Q96N76 676 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 WDR6Q9NNW5 1121 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 BLOC1S4Q9NUP1 217 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
CCHCR1-215ENST00000488920 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 MEFVO15553 781 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 SLC26A4O43511 780 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 TOM1L1O75674 476 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 ZMYND10O75800 440 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 KCNE1P15382 129 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 PLCG1P19174 1290 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 PDCP20941 246 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 FGFR3P22607 806 aa13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 GBP2P32456 591 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-215ENST00000488920 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms