RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CHP1Q99653 195 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 CELF4Q9BZC1 486 aaKnown RBP11.83□□□□□ -0.52
COL21A1-211ENST00000488912 PAK6Q9NQU5 681 aaPredicted RBP11.83□□□□□ -0.52
COL21A1-211ENST00000488912 TRMT13Q9NUP7 481 aaKnown RBP11.83□□□□□ -0.52
COL21A1-211ENST00000488912 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
COL21A1-211ENST00000488912 MEA1Q16626 185 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
COL21A1-211ENST00000488912 RAD9BQ6WBX8 426 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 C15orf39Q6ZRI6 1047 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 ARRDC4Q8NCT1 418 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 TAS1R2Q8TE23 839 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 SEMA4DQ92854 862 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 CGRRF1Q99675 332 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 CDY2AQ9Y6F7 541 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 M0QZ92 97 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 CXCL8P10145 99 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 HNRNPH3P31942 346 aaKnown RBP11.82□□□□□ -0.52
COL21A1-211ENST00000488912 KCNJ6P48051 423 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 PCBP1Q15365 356 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL21A1-211ENST00000488912 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
COL21A1-211ENST00000488912 IQCEQ6IPM2 695 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 CYP26C1Q6V0L0 522 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 RSPH3Q86UC2 560 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 TMTC1Q8IUR5 882 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 DEFB118Q96PH6 123 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL21A1-211ENST00000488912 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 APEX2Q9UBZ4 518 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 COQ4Q9Y3A0 265 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 RALGAPA2Q2PPJ7 1873 aa11.82□□□□□ -0.52
COL21A1-211ENST00000488912 USP27XA6NNY8 438 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 MEFVO15553 781 aaPredicted RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 CHRNA1P02708 482 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 STAG3L1P0CL83 205 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 ZACNQ401N2 412 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 PHLDB3Q6NSJ2 640 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 TOGARAM2Q6ZUX3 1019 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 FBXL13Q8NEE6 735 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 OR5B17Q8NGF7 314 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 ADPGKQ9BRR6 497 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 SENP6Q9GZR1 1112 aaPredicted RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 PIN4Q9Y237 131 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 TRPV2Q9Y5S1 764 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 KBTBD13C9JR72 458 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 PLEKP08567 350 aaPredicted RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 CLTAP09496 248 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 CCL5P13501 91 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 THPOP40225 353 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 JAM2P57087 298 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 SLC20A2Q08357 652 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 RPAINQ86UA6 219 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 FAM228AQ86W67 206 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 WDR49Q8IV35 697 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 ARHGEF19Q8IW93 802 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 DHX38Q92620 1227 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 ELMO3Q96BJ8 720 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 SPAG5Q96R06 1193 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 DESI2Q9BSY9 194 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 EIF2AQ9BY44 585 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 RNF208Q9H0X6 261 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 RPF1Q9H9Y2 349 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 RAB20Q9NX57 234 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 PHF24Q9UPV7 400 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
COL21A1-211ENST00000488912 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
COL21A1-211ENST00000488912 NPTXRO95502 500 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 MGAT3Q09327 533 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 BIRC3Q13489 604 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 DCAF4L1Q3SXM0 396 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 SFMBT2Q5VUG0 894 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 EFCAB13Q8IY85 973 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 MTMR12Q9C0I1 747 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 NUCKS1Q9H1E3 243 aaKnown RBP11.8□□□□□ -0.52
COL21A1-211ENST00000488912 ARHGAP20Q9P2F6 1191 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 DNM1LO00429 736 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 B4GALT4O60513 344 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 VNN1O95497 513 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
COL21A1-211ENST00000488912 AXLP30530 894 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 CDK17Q00537 523 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 ARID5AQ03989 594 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 PTK7Q13308 1070 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 SCARA3Q6AZY7 606 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 CCAR2Q8N163 923 aaKnown RBP11.8□□□□□ -0.52
COL21A1-211ENST00000488912 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 SYN2Q92777 582 aaPredicted RBP11.8□□□□□ -0.52
COL21A1-211ENST00000488912 PI4K2AQ9BTU6 479 aa11.8□□□□□ -0.52
COL21A1-211ENST00000488912 GPR88Q9GZN0 384 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms