RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 ANKLE1Q8NAG6 615 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZSWIM2Q8NEG5 633 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 WNT8BQ93098 351 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 SLC35C1Q96A29 364 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 NUP58Q9BVL2 599 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 CCDC94Q9BW85 323 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM6Q9C030 488 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 HAPLN2Q9GZV7 340 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 CDT1Q9H211 546 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 PDZD7Q9H5P4 517 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 PTPRHQ9HD43 1115 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 RBAKQ9NYW8 714 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 NOC2LQ9Y3T9 749 aaKnown RBP8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.1
APOBEC3A-203ENST00000488758 DCDC2CA8MYV0 355 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ABLIM1O14639 778 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 P4HA2O15460 535 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 PQBP1O60828 265 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 NPTXRO95502 500 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ADRB2P07550 413 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CLTAP09496 248 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM49P0CI25 452 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM49CP0CI26 452 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 STAG3L1P0CL83 205 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 DLATP10515 647 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CKBP12277 381 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 TNNI1P19237 187 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 HOXA11P31270 313 aaPredicted RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 GTF2H1P32780 548 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 PBX1P40424 430 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 FMO5P49326 533 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 FXR1P51114 621 aaKnown RBP eCLIP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 GSDMDP57764 484 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 DLG4P78352 724 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 BFSP2Q13515 415 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM14Q14142 442 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM71Q2Q1W2 868 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 SEZ6Q53EL9 994 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZNF618Q5T7W0 954 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 SLC27A1Q6PCB7 646 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CRELD2Q6UXH1 353 aaPredicted RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 GBP6Q6ZN66 633 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CCDC186Q7Z3E2 898 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 FAM228AQ86W67 206 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 FAM126BQ8IXS8 530 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CAGE1Q8TC20 777 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 PARD3BQ8TEW8 1205 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CPLX3Q8WVH0 158 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 DHX38Q92620 1227 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CCDC51Q96ER9 411 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ACAP3Q96P50 834 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ERGIC2Q96RQ1 377 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CRACR2AQ9BSW2 395 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CHST12Q9NRB3 414 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 AGPAT5Q9NUQ2 364 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 CPSF3Q9UKF6 684 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ST3GAL5Q9UNP4 418 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 PIN4Q9Y237 131 aaKnown RBP8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 SQORQ9Y6N5 450 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 ITIH6Q6UXX5 1313 aa8.2□□□□□ -1.1
APOBEC3A-203ENST00000488758 GTPBP10A4D1E9 387 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 LRRIQ3A6PVS8 624 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 AKR1B15C9JRZ8 316 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 NRDCO43847 1150 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 IL18RAPO95256 599 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 GHRP10912 638 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 TRIM21P19474 475 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 TNFSF9P41273 254 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 GRM5P41594 1212 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 GCLMP48507 274 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 AP3M2P53677 418 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 YARSP54577 528 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 MCCD1P59942 119 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 MYL7Q01449 175 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 POU5F1Q01860 360 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 PPP3CAQ08209 521 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 RBL2Q08999 1139 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 PAK2Q13177 524 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 TBX2Q13207 712 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 FBXO47Q5MNV8 452 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZBTB41Q5SVQ8 909 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 KRT39Q6A163 491 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 TWF2Q6IBS0 349 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 BRSK2Q8IWQ3 736 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 CD302Q8IX05 232 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 HACE1Q8IYU2 909 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 ZNF397Q8NF99 534 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 NEK11Q8NG66 645 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 IQCDQ96DY2 449 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 C11orf49Q9H6J7 331 aa8.19□□□□□ -1.1
APOBEC3A-203ENST00000488758 TMEM8AQ9HCN3 771 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms