RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SYNPO2Q9UMS6 1093 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 CDY2AQ9Y6F7 541 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 CENPVL1A0A0U1RR11 272 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 ZAR1LA6NP61 321 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 PRPF3O43395 683 aaKnown RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 LPXNO60711 386 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 ABLIM3O94929 683 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 GAAP10253 952 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 PF4V1P10720 104 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 MTHFD2P13995 350 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 XPAP23025 273 aaPredicted RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 RECQLP46063 649 aaPredicted RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 MRPS21P82921 87 aaKnown RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 PIN1Q13526 163 aaPredicted RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 PPP2R5AQ15172 486 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 TIGD2Q4W5G0 525 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 WDR75Q8IWA0 830 aaKnown RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 TPH2Q8IWU9 490 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 CHPFQ8IZ52 775 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 BEND2Q8NDZ0 799 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 PIK3C3Q8NEB9 887 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 RSAD2Q8WXG1 361 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 UIMC1Q96RL1 719 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 CPPED1Q9BRF8 314 aaPredicted RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 ACE2Q9BYF1 805 aaPredicted RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 RHOBTB2Q9BYZ6 727 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 OSBPL6Q9BZF3 934 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 TOR3AQ9H497 397 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 ZNF277Q9NRM2 450 aaPredicted RBP4.29□□□□□ -1.72
CD46-215ENST00000488596 TUBD1Q9UJT1 453 aa4.29□□□□□ -1.72
CD46-215ENST00000488596 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 MASP2O00187 686 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 TRIM24O15164 1050 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 TSPAN6O43657 245 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 NDUFS2O75306 463 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 RECQL4O94761 1208 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 ZRANB2O95218 330 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD46-215ENST00000488596 LY86O95711 162 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 IL33O95760 270 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 CT47B1P0C2W7 299 aaPredicted RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 GSPT1P15170 499 aaKnown RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 LAG3P18627 525 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 CLK3P49761 638 aaKnown RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 CMTR2Q8IYT2 770 aaKnown RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 LILRA3Q8N6C8 439 aaPredicted RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 PPP1R14CQ8TAE6 165 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 LSM14BQ9BX40 385 aaKnown RBP4.28□□□□□ -1.72
CD46-215ENST00000488596 CDH19Q9H159 772 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 KCNH6Q9H252 994 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 DMRT3Q9NQL9 472 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 DNM3Q9UQ16 869 aa4.28□□□□□ -1.72
CD46-215ENST00000488596 KIAA0355O15063 1070 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 SEC24DO94855 1032 aaPredicted RBP4.27□□□□□ -1.73
CD46-215ENST00000488596 FSBPO95073 299 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 APOBEC3AP31941 199 aaPredicted RBP4.27□□□□□ -1.73
CD46-215ENST00000488596 CASRP41180 1078 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 GPR15P49685 360 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 SLC5A3P53794 718 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 C21orf58P58505 322 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 KRTAP10-9P60411 292 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 KRTAP10-11P60412 298 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 KIF23Q02241 960 aaPredicted RBP4.27□□□□□ -1.73
CD46-215ENST00000488596 VPS72Q15906 364 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 ADRM1Q16186 407 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 MAN2A1Q16706 1144 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 LMBR1LQ6UX01 489 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 ABHD15Q6UXT9 468 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 Q6YL49 198 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 C14orf80Q86SX3 495 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 ADGRG3Q86Y34 549 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 OR52N2Q8NGI0 321 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 NRG4Q8WWG1 115 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 DPF2Q92785 391 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 FATE1Q969F0 183 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 HSPBAP1Q96EW2 488 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 MYEOVQ96EZ4 313 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 FAM193BQ96PV7 902 aaPredicted RBP4.27□□□□□ -1.73
CD46-215ENST00000488596 EPC1Q9H2F5 836 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 ANKFY1Q9P2R3 1169 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
CD46-215ENST00000488596 SERPINB13Q9UIV8 391 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 ANKRD6Q9Y2G4 727 aa4.27□□□□□ -1.73
CD46-215ENST00000488596 E2F8A0AVK6 867 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 NRP2O60462 931 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 PPFIA4O75335 1185 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 ALDH1A2O94788 518 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 GYPEP15421 78 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 ADSLP30566 484 aaPredicted RBP4.26□□□□□ -1.73
CD46-215ENST00000488596 ZEB1P37275 1124 aaPredicted RBP4.26□□□□□ -1.73
CD46-215ENST00000488596 NRG3P56975 720 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 KRT85P78386 507 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 NOMO1Q15155 1222 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 UBE3CQ15386 1083 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 CCDC178Q5BJE1 867 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 METTL24Q5JXM2 366 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 COLEC12Q5KU26 742 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 TMEM240Q5SV17 173 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 BTNL9Q6UXG8 535 aa4.26□□□□□ -1.73
CD46-215ENST00000488596 FAM83AQ86UY5 434 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms