RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 DESI2Q9BSY9 194 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 MTMR10Q9NXD2 777 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 TOM1L1O75674 476 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 PRKCBP05771 671 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 ACTN1P12814 892 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 PHKA2P46019 1235 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 MXI1P50539 228 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 PPP3CAQ08209 521 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 RNPC3Q96LT9 517 aaKnown RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 NLRP4Q96MN2 994 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 INTS2Q9H0H0 1204 aaKnown RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 AIPL1Q9NZN9 384 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 CXXC1Q9P0U4 656 aaPredicted RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 MYO9BQ13459 2157 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 TET1Q8NFU7 2136 aa13.77□□□□□ -0.2
NELFE-209ENST00000488426 SPTBN5Q9NRC6 3674 aaKnown RBP13.77□□□□□ -0.2
NELFE-209ENST00000488426 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 EIF3CLB5ME19 914 aaKnown RBP13.77□□□□□ -0.21
NELFE-209ENST00000488426 IPO7O95373 1038 aaKnown RBP13.77□□□□□ -0.21
NELFE-209ENST00000488426 SERPING1P05155 500 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 KRT83P78385 493 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 ZNF200P98182 395 aaPredicted RBP13.77□□□□□ -0.21
NELFE-209ENST00000488426 GDF6Q6KF10 455 aaPredicted RBP13.77□□□□□ -0.21
NELFE-209ENST00000488426 FMNL3Q8IVF7 1028 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 MAP7D2Q96T17 732 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 EIF3CQ99613 913 aaKnown RBP13.77□□□□□ -0.21
NELFE-209ENST00000488426 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.21
NELFE-209ENST00000488426 MSTO1Q9BUK6 570 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 KATNAL1Q9BW62 490 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 FZD8Q9H461 694 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 TMEM8AQ9HCN3 771 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 ARHGAP20Q9P2F6 1191 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 NRCAMQ92823 1304 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 SCN5AQ14524 2016 aa13.77□□□□□ -0.21
NELFE-209ENST00000488426 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
NELFE-209ENST00000488426 HAS3O00219 553 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 ACKR2O00590 384 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 CLDN3O15551 220 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 KPNA6O60684 536 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 EDN1P05305 212 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 CLDN10P78369 228 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 APBA1Q02410 837 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
NELFE-209ENST00000488426 PSMD6Q15008 389 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 FAM187BQ17R55 369 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 MARCH8Q5T0T0 291 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 GUCD1Q96NT3 240 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
NELFE-209ENST00000488426 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
NELFE-209ENST00000488426 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 HDAC6Q9UBN7 1215 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 APEX2Q9UBZ4 518 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 AKT3Q9Y243 479 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 COQ4Q9Y3A0 265 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
NELFE-209ENST00000488426 GCLMP48507 274 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 PSEN2P49810 448 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 JAM2P57087 298 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 MBTD1Q05BQ5 628 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 RAPGEF1Q13905 1077 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 MFSD10Q14728 455 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 ASIC2Q16515 512 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 KIAA0753Q2KHM9 967 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 KRT39Q6A163 491 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 ACRBPQ8NEB7 543 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 ZBTB10Q96DT7 871 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 ZBTB45Q96K62 511 aaPredicted RBP13.76□□□□□ -0.21
NELFE-209ENST00000488426 HAPLN2Q9GZV7 340 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
NELFE-209ENST00000488426 INO80B-WBP1J3KQ70 363 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 SMIM10L2AP0DMW4 78 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 SMIM10L2BP0DMW5 78 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 PROZP22891 400 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 PBX2P40425 430 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 NLRP11P59045 1033 aaKnown RBP13.75□□□□□ -0.21
NELFE-209ENST00000488426 ETF1P62495 437 aaKnown RBP13.75□□□□□ -0.21
NELFE-209ENST00000488426 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 MCL1Q07820 350 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 PRPF4BQ13523 1007 aaKnown RBP13.75□□□□□ -0.21
NELFE-209ENST00000488426 GPNMBQ14956 572 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
NELFE-209ENST00000488426 HGSNATQ68CP4 663 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms