RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 KCNG1Q9UIX4 513 aa24.83■■□□□ 1.57
PTPN4-211ENST00000488279 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.83■■□□□ 1.57
PTPN4-211ENST00000488279 ZNF318Q5VUA4 2279 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 VWA3AA6NCI4 1184 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 AVPR2P30518 371 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 YARSP54577 528 aaKnown RBP24.82■■□□□ 1.56
PTPN4-211ENST00000488279 HYIQ5T013 277 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 ARL6IP4Q66PJ3 421 aaKnown RBP24.82■■□□□ 1.56
PTPN4-211ENST00000488279 NT5C3AQ9H0P0 336 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 SMOC2Q9H3U7 446 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 PIDD1Q9HB75 910 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 ARHGAP28Q9P2N2 729 aa24.82■■□□□ 1.56
PTPN4-211ENST00000488279 SFI1A8K8P3 1242 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 PAPLNO95428 1278 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 GUCY2CP25092 1073 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 GLRA4Q5JXX5 417 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 LARP1BQ659C4 914 aaKnown RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 PDXDC1Q6P996 788 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 DCLRE1AQ6PJP8 1040 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 ALYREFQ86V81 257 aaKnown RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 LNX1Q8TBB1 728 aaPredicted RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 PIK3R5Q8WYR1 880 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 CDK5RAP3Q96JB5 506 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 PPP1R10Q96QC0 940 aaKnown RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 NTPCRQ9BSD7 190 aaKnown RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 TCHPQ9BT92 498 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 CCDC94Q9BW85 323 aaPredicted RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 TARS2Q9BW92 718 aaKnown RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 PTPRHQ9HD43 1115 aa24.81■■□□□ 1.56
PTPN4-211ENST00000488279 TOPORSQ9NS56 1045 aaPredicted RBP24.81■■□□□ 1.56
PTPN4-211ENST00000488279 B3GAT3O94766 335 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 PDGFBP01127 241 aaPredicted RBP24.8■■□□□ 1.56
PTPN4-211ENST00000488279 GRM5P41594 1212 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 PTPN5P54829 565 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 VCPP55072 806 aaKnown RBP24.8■■□□□ 1.56
PTPN4-211ENST00000488279 MAPK7Q13164 816 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 TDGQ13569 410 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 PSMD5Q16401 504 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 ZNF568Q3ZCX4 644 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 SYT2Q8N9I0 419 aaPredicted RBP24.8■■□□□ 1.56
PTPN4-211ENST00000488279 PRSS33Q8NF86 280 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 ZNF707Q96C28 371 aaPredicted RBP24.8■■□□□ 1.56
PTPN4-211ENST00000488279 UROC1Q96N76 676 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 PNMA5Q96PV4 448 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 CLSTN3Q9BQT9 956 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 PRKD2Q9BZL6 878 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 CDT1Q9H211 546 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 KCNK12Q9HB15 430 aa24.8■■□□□ 1.56
PTPN4-211ENST00000488279 MYO10Q9HD67 2058 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 SMIM28A0A1B0GU29 152 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 SLC16A4O15374 487 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 GBP2P32456 591 aaPredicted RBP24.79■■□□□ 1.56
PTPN4-211ENST00000488279 CLCNKBP51801 687 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 SMTNP53814 917 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 OSTNP61366 133 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 TAS1R3Q7RTX0 852 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 TBC1D32Q96NH3 1257 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 PLIN2Q99541 437 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 IGSF9Q9P2J2 1179 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 CLUHO75153 1309 aa24.79■■□□□ 1.56
PTPN4-211ENST00000488279 ZDBF2Q9HCK1 2354 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 TMEM189-UBE2V1I3L0A0 370 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 ZMYND10O75800 440 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 MCF2P10911 925 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 PLS3P13797 630 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 RAD51AP2Q09MP3 1159 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 STRN3Q13033 797 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 UPP1Q16831 310 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 ALKAL1Q6UXT8 129 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.78■■□□□ 1.56
PTPN4-211ENST00000488279 CEP120Q8N960 986 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 SPIRE2Q8WWL2 714 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 ACAP3Q96P50 834 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 KCND2Q9NZV8 630 aa24.78■■□□□ 1.56
PTPN4-211ENST00000488279 TRAPPC3O43617 180 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 N4BP1O75113 896 aaKnown RBP24.77■■□□□ 1.56
PTPN4-211ENST00000488279 PLA2G4BP0C869 781 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 SLC12A3P55017 1021 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 XKR4Q5GH76 650 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 LIN9Q5TKA1 542 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 AK8Q96MA6 479 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 MFSD1Q9H3U5 465 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 SLC38A7Q9NVC3 462 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.77■■□□□ 1.56
PTPN4-211ENST00000488279 PIEZO1Q92508 2521 aa24.77■■□□□ 1.56
PTPN4-211ENST00000488279 FGFR3P22607 806 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 PROZP22891 400 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 MRE11P49959 708 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 NUBP1P53384 320 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 MPZL3Q6UWV2 235 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 DDX27Q96GQ7 796 aaKnown RBP24.76■■□□□ 1.55
PTPN4-211ENST00000488279 EPS15L1Q9UBC2 864 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 FBXW11Q9UKB1 542 aa24.76■■□□□ 1.55
PTPN4-211ENST00000488279 SLC26A4O43511 780 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 IGFBP6P24592 240 aaPredicted RBP24.75■■□□□ 1.55
PTPN4-211ENST00000488279 UBA7P41226 1012 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 TCF15Q12870 199 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 TMEM119Q4V9L6 283 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 TMEM161BQ8NDZ6 487 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 MYADMQ96S97 322 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms