RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 SF3B1O75533 1304 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCYT1A-215ENST00000488235 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 DOCK6Q96HP0 2047 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 I3L4J1 428 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 ABLIM1O14639 778 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 GJB2P29033 226 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 PRPHP41219 470 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 CLCNKBP51801 687 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 EFNA5P52803 228 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 OSTNP61366 133 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 ATP2C1P98194 919 aaPredicted RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 SOX4Q06945 474 aaPredicted RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 RAD51AP2Q09MP3 1159 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 OTOP3Q7RTS5 596 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 ZBTB45Q96K62 511 aaPredicted RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 ACO2Q99798 780 aaKnown RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 TARS2Q9BW92 718 aaKnown RBP12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 NT5C3AQ9H0P0 336 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 CLUHO75153 1309 aa12.35□□□□□ -0.43
PCYT1A-215ENST00000488235 DOCK8Q8NF50 2099 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 K7ERI5 159 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 SLC16A4O15374 487 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 CENPBP07199 599 aaPredicted RBP12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 NPR3P17342 541 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 NTHL1P78549 312 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 PSMD5Q16401 504 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 KRT79Q5XKE5 535 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 CWF19L1Q69YN2 538 aaKnown RBP12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 ALKAL1Q6UXT8 129 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 GPR65Q8IYL9 337 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 ACSF2Q96CM8 615 aaPredicted RBP12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 ADPGKQ9BRR6 497 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 TTPALQ9BTX7 342 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 RHOBTB2Q9BYZ6 727 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 PLEKHA4Q9H4M7 779 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 PHLPP2Q6ZVD8 1323 aa12.34□□□□□ -0.43
PCYT1A-215ENST00000488235 SMIM28A0A1B0GU29 152 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 VWA3AA6NCI4 1184 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 H0Y858 1186 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 LAD1O00515 517 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 PI15O43692 258 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 FGFR3P22607 806 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 PROZP22891 400 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 TKTP29401 623 aaKnown RBP12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 BRCC3P46736 316 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 PTPN5P54829 565 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 GRIN1Q05586 938 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 TDGQ13569 410 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 UPP1Q16831 310 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 SEZ6Q53EL9 994 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 XKR4Q5GH76 650 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 HYIQ5T013 277 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 HAPLN2Q9GZV7 340 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 TMEM134Q9H6X4 195 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 DUSP12Q9UNI6 340 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 DNAH14Q0VDD8 3507 aa12.33□□□□□ -0.44
PCYT1A-215ENST00000488235 TRIP11Q15643 1979 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 ST18O60284 1047 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 ZMYND10O75800 440 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 B3GAT3O94766 335 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 HARSP12081 509 aaKnown RBP12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 GUCY2CP25092 1073 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 GRM5P41594 1212 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 DMP1Q13316 513 aaPredicted RBP12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 TMEM119Q4V9L6 283 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 ARSHQ5FYA8 562 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 POTEHQ6S545 545 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 GRASPQ7Z6J2 395 aaPredicted RBP12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 SYT2Q8N9I0 419 aaPredicted RBP12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 TMEM161BQ8NDZ6 487 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 SNX27Q96L92 541 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 RPP25Q9BUL9 199 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms